Malus sylvestris (European crab apple): 126632878
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Entry
126632878 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126632878 isoform X1
KO
K22611
spliceosome associated factor 3, U4/U6 recycling protein
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msyl03041
]
126632878
03036 Chromosome and associated proteins [BR:
msyl03036
]
126632878
Spliceosome [BR:
msyl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
126632878
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
126632878
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
HAT_Syf1_CNRKL1_C
TPR_14
Lsm_interact
xRRM
MOSP_C
MDH
RRM_RdRP1_2
Motif
Other DBs
NCBI-GeneID:
126632878
NCBI-ProteinID:
XP_050159365
LinkDB
All DBs
Position
8:complement(30063261..30120638)
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AA seq
825 aa
AA seq
DB search
MEEETLNPLTSEQGNNDDQSMPDLPDQDLGSSDSYSDSDSGSEDGDDQAHQNLQLQTLEA
ELSTNPANYDTHVQYIKILRQMADIEKLRQAREAMNQLFPLTPSMWQDWAKDDASLSTGS
DAFLAIEKLYERGVFEYLSISLWRDYLDFVKENDPSIRECSPAGISKARDLFERALTAAG
LHVSEGNKLWEAYRSFELAIFHTIDEKDNQAREKQIQRIRSLFHRQLSVPHVNMRSTLLD
YKAWEVEQGNILDAGSSDLDGISFQVASAYKKALEMYDARVHLEEQICRQDMSDSERLQN
FMNYLRFEQSSGDPARVQMLYERAITDFPISSYLWLDYTHYLDKTLKVGNVITNVYSRAV
MNCPSVGELWVRYMLSLERGHASEKEIASVFEKSLLCTLTLDEYLDLYLTRVDSLRRRIS
CAIEGEHGLEYSLIRETFQNASDYLSAYLKNTDGLLRLHAYWARLELNLHKDQLAARGVW
ETLLKLCGSMLEAWQGYIAMETELGHVNEARALYRRCYSKRFLGTGSEDICHSWLRFERE
FGSLDDFDHAVQKVTPRLEELELFKSQQESKLTEENPLKKNARDKRKQVSDVPNEQHPAK
RQKDAAQKPKKAHGKDSEVMNSVEQTKVEKTKATGDQPDIENEQQIKKRGPEKRKVYADQ
CTVFVSNINLKANDEHLRQFFSDVGGVVAIRILHDKFTGKSRGLAYVDFSDDGHLVAAVA
KNKQVLLGKKLSIARSDPKHGKKEHARGAESNNSAEASNAPRARQAQQSTYNRGSNNVQL
RGKNTFATPRNILALGHSTNKPKTEEQDDEKPKSNDEFRNMFRKG
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaaaccctaaacccccttacttctgaacaaggcaacaatgacgaccaatcc
atgccggacctccctgaccaagaccttggctcctccgattcctattccgactccgattct
ggctctgaggatggcgacgaccaagcccaccaaaacctccaactccaaaccctagaagcc
gagctctccaccaatcctgccaactacgatactcatgtccaatacataaagattctgagg
caaatggctgacattgaaaagctaaggcaagcaagggaagctatgaaccaactgtttccg
ttaaccccttctatgtggcaggattgggctaaggacgatgcttctctttccactgggtct
gatgcttttttggctattgaaaagctttacgagcgaggagtctttgaatatctgtccatc
tctctttggcgcgactacttagattttgttaaagagaatgatccctcaataagagaatgt
tcacctgctggtatttcgaaggcaagagatctatttgaacgtgctcttactgcagctggt
ttgcatgtttctgaaggcaataaactatgggaagcctaccggtcatttgagcttgctata
tttcataccatcgatgagaaagacaatcaggcaagagaaaagcaaattcagcgtatccgc
tctttattccaccgtcagttgtcagtcccccatgttaacatgaggtcaacacttttggat
tacaaggcatgggaagtggaacaaggaaacattcttgatgctggctccagtgacctggat
ggaatttcattccaggttgcctcggcatataaaaaggcattggaaatgtatgatgctcgc
gttcatcttgaggaacagatttgtcggcaggatatgtcggactcggaaagacttcaaaat
ttcatgaactacttgagatttgaacagtcttccggagacccagcccgggttcagatgttg
tatgaacgtgctattactgactttcctatatccagttatctctggcttgattatactcac
tatttggacaaaacattgaaggttggcaatgttataaccaacgtttattccagggctgta
atgaattgcccctctgttggagagctttgggtccgatatatgctttccttggagcgtggt
catgcttctgagaaagagattgcctctgtatttgagaagtctctgctatgcactttaacc
cttgatgagtacctagatttgtacctcacacgcgtagatagcttaagaagaagaatctca
tgcgccattgaaggagaacatgggttggagtattcattaatcagggaaacctttcagaat
gcatcagattacttgtcagcatacctgaagaatacggatggcttgctacgtttgcatgct
tattgggcccgtttagagctaaacctgcataaggaccaacttgcagctcgtggagtctgg
gagactttacttaagctctgtggttcaatgctggaagcctggcaaggttatatagcaatg
gaaactgaattgggtcatgttaatgaagctcgggccctatataggagatgttacagtaaa
agatttctcggaactggttcagaggacatctgccactcgtggttacgttttgagagggag
tttggttcgttggatgattttgaccatgcagtacagaaggtcactcctcgtctggaagag
ctagaattatttaagtcacaacaagaatccaaattgacagaagagaatcctttgaagaag
aatgctcgtgacaagagaaagcaagtttctgacgtacctaatgaacaacatccagcaaag
aggcaaaaagatgcagctcaaaagcctaagaaagcacatgggaaggattctgaggtgatg
aactcagttgaacaaactaaagtggaaaagaccaaggccacgggtgaccaaccagatata
gaaaatgagcaacagatcaaaaagcgtggtccagagaaaagaaaagtatatgccgaccag
tgtactgtttttgtttcaaatattaaccttaaggcaaatgatgaacatttgcgtcaattc
ttcagtgatgttgggggagtggttgctataagaatactacatgacaagttcactggaaag
tcaaggggactggcatatgtggatttctcagatgatggccacctcgttgcagctgttgca
aaaaataagcaggtgctccttgggaagaagctgagcattgcacgatcagatccaaagcat
gggaagaaggaacatgccaggggagccgagtctaataattctgctgaggcctccaatgcg
cctagggcacgtcaagcacagcagtctacctataaccgaggaagcaataatgtacagctg
aggggtaagaacacatttgcaactcccaggaatatccttgcacttggtcatagtacgaat
aaaccaaaaactgaggaacaggatgatgaaaagccaaaatccaatgatgagttcagaaac
atgttccgcaaaggttag
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