Malus sylvestris (European crab apple): 126632899
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Entry
126632899 CDS
T09027
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126632899
04121 Ubiquitin system [BR:
msyl04121
]
126632899
Enzymes [BR:
msyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126632899
Membrane trafficking [BR:
msyl04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
126632899
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126632899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-Nse
zf-ANAPC11
zf-C3HC4_3
zf_RING_Vps8
FANCL_C
DUF4234
Motif
Other DBs
NCBI-GeneID:
126632899
NCBI-ProteinID:
XP_050159388
LinkDB
All DBs
Position
8:complement(19337711..19340427)
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AA seq
335 aa
AA seq
DB search
MSLSPPRSRDINNDDGTTPLYGLYWCYHCNRTVRTASNNPSETVCPRCFGQFLSEFDMSI
TPRLLVDYTSFDPSPEARLLEALSLMFDPLMRPFNRELYDPEADSRGRPWYWRRHLGHEG
RGAGVEPEVQDLRTNRRRRRRNPSFDGRENWEVESEPRTRSRPRNLIIVRPVEDPSNPVG
PTHRPQENPVLPAPRGVDLGNYFFGPGLHGLIEELTQNDRPGPPPVPEMAINAIPTVKIS
EVHLSNESCCPICMEEFKIGGEVRELSCNHIYHSDCIVPWLRLHNSCPVCRVEIQVCGGG
LVELGDSNSGGEGRTRRRVRWSRLGSLWPFRSRHL
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgagtccacctcgttcgagggacattaacaatgacgatggcacaacaccacta
tacggactctactggtgctaccattgcaatcggacggtgaggactgcctccaacaaccca
tcagagacagtctgccctcgttgtttcgggcagtttctgtcggagtttgacatgtcgatt
acacctagacttctcgtagactacaccagtttcgatccatccccggaagctcgtctgctc
gaagcactttccctcatgttcgatccgctcatgaggcctttcaaccgtgaattatatgac
ccggaagccgattccagaggacgtccatggtattggcgacgccaccttggccatgagggc
agaggtgcaggtgtagaacctgaagttcaagatttgaggacaaataggagacggaggcgg
cgcaaccctagctttgatggtagagaaaactgggaggttgaatctgagccccgcactcga
agccgtcccaggaatttgattatagtccgacccgtggaagacccttctaatccagtggga
cccactcatagaccacaagaaaatccagtactacccgctccacgtggagtcgatctagga
aactacttttttgggccgggccttcacggactgatcgaagaactaacccaaaacgacagg
cccggcccgcctccagtacccgaaatggcaatcaacgcaataccaactgtgaaaatcagc
gaggtccatttgagcaatgagtcttgttgcccaatttgcatggaggagtttaagattggt
ggagaggtgagggagttgtcatgcaatcacatataccacagcgattgtattgttccgtgg
ctgaggctccacaactcttgcccggtttgccgggtcgagattcaggtatgcggtggcgga
ttggtagagttgggggactcgaatagtggcggagaggggcggacaagacggcgcgtgagg
tggagtaggttgggatctttgtggccatttcgatcaaggcatctttga
DBGET
integrated database retrieval system
