Malus sylvestris (European crab apple): 126633055
Help
Entry
126633055 CDS
T09027
Name
(RefSeq) long chain base biosynthesis protein 1-like isoform X1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00600
Sphingolipid metabolism
msyl01100
Metabolic pathways
Module
msyl_M00094
Ceramide biosynthesis
msyl_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
126633055
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
msyl01007
]
126633055
Enzymes [BR:
msyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
126633055
Amino acid related enzymes [BR:
msyl01007
]
Aminotransferase (transaminase)
Class II
126633055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
Aminotran_5
OKR_DC_1
AF2212-like
Motif
Other DBs
NCBI-GeneID:
126633055
NCBI-ProteinID:
XP_050159555
LinkDB
All DBs
Position
8:7462323..7468213
Genome browser
AA seq
486 aa
AA seq
DB search
MSSSILNIVNATVDWVTATLDAPSSRAVIFGFPIGGHLFVEVLLFLVIVYLFSQNSYRPP
RRPLTEQEKDELCEEWAPEPLIPSITEEKLYEPPVLESAAGPHTIINGKEVVNFASANYL
GLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIANFLGTPDSILYSYGLS
TMFSAIPAFAKKGDIIVVDEGVHWGIQNGLHLSRSTIKYFKHNDMEDLRKILKELTSNKK
SERVKKLRRYIVVEAVYQNSGQIAPLDKIVELKEKYKFRVLLDESNSFGVLGKSGRGLTE
YCRIPVEKIDIITAAMGHALATEGGFCTGSARVTDHQRLSSSGYVFSASLPPYLASAAIT
AIDILEENPDLITKLKKNIAELWKGLSGIRGLSFASSPESPIVFLRLEKADSLKNELQLQ
LLQNIANSLLKEHSIFVVTSQKSTLDKCRLPLGIRLFVSAGHTESDLLKAAASLKSVAEL
VLKDHI
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaagcattctgaacatagtgaatgctactgtagattgggtgacggcgacttta
gatgctccctcttctcgagctgttattttcggatttccaattggcggacatttatttgta
gaagttctgcttttcttagtcatcgtttatttattttcccagaacagttacagaccgcct
aggcggcctttaacagagcaggaaaaagatgagctatgtgaggaatgggctcctgaacct
cttattccttctatcactgaagagaagctgtatgaacccccagtgttggaaagtgctgca
gggccacatacaataatcaatggtaaagaagtcgtgaactttgcttcagcaaattatctg
ggattgataggacatgagaagttacttgagtcatgtacctctgcattggaaaaatatggt
gttggttcatgtggtcctcgtgggttttatggaacaattgatgtccaccttgattgtgag
gcgagaatagcaaacttcttgggaactccggactcaattctatattcttatggactgtct
accatgttcagtgcaattccagcatttgccaagaagggggatattattgttgtagatgaa
ggtgtccattggggaatacaaaatggtcttcatctttctaggagcacaatcaagtatttc
aagcacaatgacatggaagatttaaggaaaattctgaaggaactcacttcaaataagaaa
agtgagcgagttaagaaattgcggcgctacattgtagttgaagctgtataccagaattct
ggccaaatagcccccttggacaagattgttgaattgaaggagaaatataagtttcgtgtt
ttattggatgagagtaactcgtttggcgtgcttggaaaatccggaagaggtctcactgaa
tactgtaggattccggttgaaaaaatagatattattactgctgcaatgggacacgcatta
gccacagaaggaggattctgcactggaagtgctagggtcactgatcaccaacgattgagc
agctctggttacgtcttttctgcttctttgcccccatatcttgcgagtgctgccattact
gctattgatatcctcgaggaaaaccctgacctgataacgaagctgaagaaaaacattgcc
gaattatggaagggattgtcaggtatacggggcctctcattcgcgagcagtccagaatca
ccgattgtcttcctcagactagagaaagcagactctttgaagaatgaactgcaacttcag
ctccttcaaaatattgctaacagtttgttaaaggagcattccattttcgtggtcacctcc
caaaagtcaacacttgataaatgccgtcttccattaggaattagattgttcgtctccgct
gggcatacagaatccgatctgctcaaggcagctgcatcactgaaaagcgttgcagaattg
gtgctgaaggatcatatttaa
DBGET
integrated database retrieval system
