Malus sylvestris (European crab apple): 126633079
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Entry
126633079 CDS
T09027
Name
(RefSeq) transcription factor SPATULA-like isoform X1
KO
K28361
transcription factor SPT/ALC
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
126633079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msyl03000
]
126633079
Transcription factors [BR:
msyl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
126633079
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
Ribosomal_S20p
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
126633079
NCBI-ProteinID:
XP_050159584
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Position
8:7656149..7659353
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AA seq
356 aa
AA seq
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MADLYGSAPDSEEISNIISELLHGHGSSASSASSSMPFKPTYMHLLHSSVPLPLQAATQS
EFLIPEARHEDHGRFAQLVDRSGTDQRVVGGNSNSAGVLESSSGFYFSDSGGYFTAEVKE
GMGPDGRRISSENDLGDFSCDSEKGLEEAPDVQLNSAPPRSSSKRSRAADVHNMSEKRRR
SRINEKMKALLNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGLSLHPMCLPGAM
QPMQLPHMGLSFEEGSNKFPKSSKGINPFYGSGENSMQSAFNLSAGYMISNPPMVIPSVA
NVPTSEPTFGFEPSVQAHYRLFSVPSSSKELFSDGEPQSKVDTIRTGKNSSSDVDV
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcggatctgtacggatcagcgccggactcggaagaaatctcgaacattatcagcgag
ctcctccacggtcacggctcctccgcttcctcagcctcttctagcatgccctttaagccc
acttacatgcacctgctgcattcgtcagtgccgctgccactccaggcggcgacgcagtcc
gagttcttgattccggaggccaggcatgaggatcatggccggtttgctcaattggtggac
cggtctggcacggaccagcgagtagtgggaggaaattcgaactctgctggtgtgttggag
tcgtcgtccgggttctacttctccgattccggtggctacttcacggcggaggtgaaagaa
ggtatggggcctgatgggaggaggatttcgtctgagaatgatctcggcgactttagctgt
gacagtgagaagggtctggaggaggcgccggacgtgcaattgaactcagcgcctccgcgg
agttcatcgaagaggagcagagctgccgatgtccataatatgtcggaaaagaggaggagg
agtaggattaacgaaaagatgaaagctttgctgaacctgattccgaattctaacaagacg
gataaggcttcgatgctggatgaagcaatcgagtatttgaagcagctccagcttcaagta
cagatgttaacgatgagaaatggattgagtttgcatccaatgtgcttaccaggagccatg
cagcctatgcagttgcctcatatgggattaagctttgaagaaggaagtaataaattccca
aaatccagcaaaggaataaaccctttttacggaagtggagagaactcaatgcaatctgct
ttcaatttatccgctggatacatgatctcaaatccaccaatggtcataccctcagttgca
aatgtcccgacttcagaacccacatttggttttgaaccatcggttcaagctcactacaga
ctcttcagtgtcccctcatcctctaaggaactcttcagtgacggtgaaccacaatcaaaa
gtagataccattcggacagggaaaaactcttcatcggatgttgatgtatga
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