Malus sylvestris (European crab apple): 126633160
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Entry
126633160 CDS
T09027
Name
(RefSeq) transcription initiation factor IIF subunit beta-like
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126633160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126633160
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
126633160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
UBR1-like_wing
Calpain_III
Motif
Other DBs
NCBI-GeneID:
126633160
NCBI-ProteinID:
XP_050159670
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All DBs
Position
8:1573202..1575493
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AA seq
270 aa
AA seq
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MGVEKRERDSTEEERGNSSSSSRMDTGRAEAPVWLMKCPVVVAKSWSSHNPSDPHPIAKV
VLSFDPLRADDPSAMEFKMEMPGSAAANLPESYSLNMFKDFVPMCVFSETNQGKVSVEGK
VDHKFDMKPHGTNIEEYGKLCRERTNKSMIKNRQIQMIDNDRGILMRPMPGMIGLVSSTS
KDKKKTAPVKQSDMKRTRRDRGELEDIVFKLFEQKQPNWTLKQLVQETNQPAQFLKEILN
ELCVYNKRGTNQGTYELKPEYKKSVEDTEE
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtcgagaagagagagagagattcgacggaggaggagcgcgggaacagcagcagc
agcagtcggatggatacggggagggcggaggctccggtatggctgatgaagtgcccggtg
gtcgtcgccaagtcgtggagctcccacaacccttccgatccccacccgatcgccaaagtc
gtcctctcttttgaccccctccgcgccgacgacccctctgccatggagttcaagatggag
atgcctggctccgcggctgcaaatttgccagaaagttattccttgaatatgtttaaagac
ttcgttcccatgtgcgttttttcggaaacaaatcaaggcaaagtttccgtggaaggtaaa
gtggatcacaagtttgatatgaagcctcacggtactaacattgaggagtatgggaagctg
tgtcgtgaaaggacaaacaaatccatgatcaagaacagacaaatacagatgatcgacaat
gaccgaggaatacttatgaggcccatgcctgggatgatcggtttggtttcatccacctca
aaggataagaagaaaacggcaccggttaaacaatcggacatgaaaaggactagaagagat
cgtggggaactggaggatatagtgttcaagttatttgaacaaaaacaaccaaactggacc
ttgaagcagctggtgcaagaaaccaatcaacctgcgcaattcttgaaagagatactgaat
gagctctgcgtttacaacaaaaggggaacgaaccagggtacttatgagctcaagccagaa
tacaagaaatctgttgaggatactgaagaataa
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