Malus sylvestris (European crab apple): 126633279
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Entry
126633279 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126633279
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msyl03016
]
126633279
Enzymes [BR:
msyl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
126633279
Transfer RNA biogenesis [BR:
msyl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
126633279
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Motif
Other DBs
NCBI-GeneID:
126633279
NCBI-ProteinID:
XP_050159805
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All DBs
Position
8:453180..459191
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AA seq
534 aa
AA seq
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MANETQDASQATVNGDNAQSLCDVVRGLPSRAVVDLWSSGVCTRCILRLFGIREHDYYRS
SLSRSILSSVLGDSEKHLVDSSVREPVVCRVCLGILQFTYSADNKLVVERESASELAVSI
SDLIRQQGFQIDSFSLEVSIPPIIQENDRIAWLYMKRKFESELWFQGKSLSECISAKDAL
KISLTEILETMLGCKSSISSFRIRLTYTHRIASITVDSSNEGCKRRKTGSGNGLDRINDD
IKCSGFWTSEADAVVERSFVSLQANESPECLKLPLEQSSEPCCLEFLCYRTQIYVGGRYL
KYSRNVSQSCWIIDDERMGEASVEEILGSNVLPICRGDNYKFHAAGREDIDVRMLGSGRP
FLLEIQNARLVPSDDSVKSLERAINNLENNLVGVKNLKLVDSQSWDLMREGEAEKQKQYV
ALVWISRPLKDEDLHFISSLKDTHIQQRTPIRVLHRRSPLEREKIIHWMRIEKIVGSSQY
FLLHLCTQAGTYIKEFVHGDLGRTQPSIGSILSCRAEILRLDVTDVKMDCFLTE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgagacccaagatgcttcgcaggccaccgttaatggcgacaatgcgcaatct
ctctgcgacgtcgtccgagggttgcctagtcgcgccgtcgtagacttatggtcctccggc
gtatgcaccagatgcatcttacggttatttgggatcagagagcatgattactatcgttct
tcactatcgcggtcaatcttgagttcagttcttggagattcagagaaacatttggtggat
agtagtgttagagaaccggtagtttgtagagtttgtttggggatcttgcagttcacttat
tctgcggataacaagttggtggtagaaagggagagtgccagtgaattggctgtttccatt
tccgatctgattaggcaacagggctttcagattgacagcttttctcttgaagtatccata
cctccaattatccaggaaaatgatcgtattgcttggctatatatgaaaagaaagtttgaa
tctgaactttggttccaaggaaaatcactctctgaatgcatttctgcaaaggatgctcta
aaaatttctcttacggagatccttgaaacaatgttgggttgtaagtccagcataagcagt
ttccgcatccgtttgacatacactcaccgtatagcatcaataacagttgatagttctaat
gaggggtgcaaaagaagaaaaacaggttcaggcaatggtttggacagaattaatgatgac
atcaaatgctctggattttggacaagtgaagctgatgcggttgttgaaaggtcttttgtg
agtttgcaagctaatgaatcgcctgagtgcctgaagttacctctagagcagtccagtgaa
ccttgttgtttagagtttctctgctaccggacgcaaatctatgttggtgggagatacctg
aagtactcgagaaatgtgagtcaatcctgttggattattgatgatgagagaatgggagaa
gcatccgttgaggagatactaggtagcaatgttcttcctatatgtcgtggtgataactac
aagtttcatgctgccggaagagaagatattgatgtaaggatgttgggttctggaaggccg
ttcctgcttgagatacaaaacgctcgccttgtcccgtctgatgactctgtaaaaagtttg
gaaagagcgataaataacttggaaaataatttggtaggtgtgaaaaatctgaagctggtt
gatagtcagtcatgggatctaatgcgtgaaggggaagcagagaaacagaagcagtatgtt
gcgttagtgtggatttctcgccctctcaaggatgaggacttgcattttatatcttcactt
aaagacacgcatattcagcagaggactcccatcagggtgcttcaccgccgaagtccatta
gaacgagaaaagatcatacattggatgagaattgagaagattgttggaagttctcagtat
tttcttttgcatctgtgtacccaggctggaacgtacattaaggaattcgttcatggggat
cttggacgcacccaacctagcattggatcaattttaagttgtagagcagagatactgcgg
ctcgatgtaacagatgtgaagatggattgctttcttactgaatga
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