Malus sylvestris (European crab apple): 126633286
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Entry
126633286 CDS
T09027
Name
(RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic isoform X1
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00730
Thiamine metabolism
msyl00900
Terpenoid backbone biosynthesis
msyl01100
Metabolic pathways
msyl01110
Biosynthesis of secondary metabolites
Module
msyl_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
126633286
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
126633286
Enzymes [BR:
msyl01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
126633286
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Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Transketolase_C_1
Motif
Other DBs
NCBI-GeneID:
126633286
NCBI-ProteinID:
XP_050159816
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All DBs
Position
8:13336004..13341011
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AA seq
715 aa
AA seq
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MGAASAGYPFGITSHCHGKLGAFPHKVEFFGSNFPLHVEFPGHKLYPSSVFPPASKEIAS
RICSLPDDDEWFLEEMLTPILDSVENPIHLKNLSVEELKQLSDEIRSELTSIMLRTRKSF
RASLAVVELTVAIHHVFHAPVDKIIWDVVEQTYAHKILTGRRGLVHTARRNNGFSGPSSR
PESEYDPFWPGHGCSSVSAGLGMAVARDIKGKRERIVSVISNGTTMAGQVYEAMGNAGYL
DSNMVVILNDSRHSLHPKTEEGPKTAISALSSTLSKLQSSKSFRRFREVAKGVTKRIGGG
MHELAAKVDEYARGMVGPLGSTLFEELGLYYIGPVDGHNVEDLICVLQEVASLNSMGPVL
VHVITEENREVENNPKSGVEGLNNSDDLQSKIHRRTYSDCFVEALVMEAEKDKDIVTVHA
GMHMETAFQLFRERFPDKFFDVGMAEQHAVTFSAGLACGGLKPFCIIPSTFLQRAYDQVV
HDVDRQRIPVRFVITSAGLVGSDGPMHCGAFDIAFMSCLPNMIVMAPSDEDELANMVATA
AYIDDRPVCFRYPRGAIVVMDHSVCSGTPIEIGKGKILAEGKDVALLGYGSMVQNCLKAR
SLLSTLGIDVTVADARFCKPLDVKLLRQLCRNHSYLITVEEGSIGGFGSHVAQFFSLNGQ
LDGNIKWRPIVLPDNYIEHASPNEQLAIAGLTGHHIAATALTLLGRNREALHLMC
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctgcttctgctgggtacccttttggaatcacttcccattgccatggaaagttg
ggggcttttcctcacaaagtggagttctttggctctaatttcccactgcatgtggaattt
ccaggacataaattgtacccaagttccgtttttccccctgcatccaaggaaattgcaagt
cgaatatgttctctacctgacgatgatgaatggttcttggaagaaatgttaacccccatt
cttgattcagttgaaaatcctatccacctgaagaacttgtctgttgaagaactgaaacag
ttatctgatgaaatccgttcagagttaacatctataatgttgagaacgcgaaagtctttc
agagccagtttggcagtggtggagttgacggttgcaatacaccatgtttttcatgctccc
gtggacaagataatttgggatgtcgtagaacaaacatatgctcataaaatacttacagga
aggcggggccttgtacatacagctcgacgaaataatggtttttctggtccttcatctcga
cctgagagtgaatatgatccattctggccagggcatgggtgcagtagcgtttctgctgga
ctgggcatggcagttgcacgggatattaaaggaaaacgggaacgtattgtttcagtcatc
agcaatgggactacgatggctggacaggtctatgaggcgatgggtaatgcaggttatttg
gactcaaatatggtagttattttaaatgacagccggcactctttacacccaaagactgag
gagggtccaaagacagctattagtgctctgtctagtaccctaagcaagctccagtcaagt
aaatcctttcgaaggtttagagaagttgctaagggtgttactaaaagaattggtggaggc
atgcatgaattggcagctaaagttgatgagtatgcacgtggtatggtcggtccactagga
tcaactctttttgaagagctcggattgtattatattggccctgttgatggacacaatgtt
gaagacctgatttgcgttctacaagaagtggcatctcttaattcaatgggtcctgttttg
gttcatgtgataacggaagaaaatcgggaagttgaaaacaacccaaagagtggggtagaa
ggtttgaataactctgatgatttacagtccaaaatccaccgtagaacttatagcgactgc
tttgtggaggctttggtgatggaggcagagaaggacaaagatatcgtaactgttcatgca
ggaatgcatatggaaacagcatttcagctatttcgtgaaagatttcctgacaagtttttt
gatgtgggaatggcagaacaacacgcagttacattttcggctggtttggcatgtggagga
ctaaagccattttgcataatcccgtctacattcctacaaagagcttatgatcaggtagtt
catgacgtagatcggcaaagaattccagtgcgttttgtcattacaagtgcagggttggta
ggatctgatggtcccatgcattgtggagcattcgatatagcatttatgtcatgcttacca
aatatgatcgtcatggcaccatccgatgaagatgagcttgccaacatggtggccactgca
gcctacattgatgatcgtccagtttgcttccgatatccaaggggcgccattgttgtgatg
gaccattccgtatgcagtgggacccccattgagattggaaaagggaaaattcttgcggag
ggtaaagatgtggcattgcttggatatggatcaatggttcagaactgcctcaaggctcgg
tctcttctttcaacactgggcattgatgtaacagttgctgatgcaaggttctgcaagccc
ttagatgtcaagcttcttaggcagctttgtcgaaaccattcatatctgatcacggttgag
gaaggttctattggaggatttggatcccatgttgcacagttcttttctctcaacggacag
cttgatggaaacattaagtggcgaccaattgttttaccggacaactacattgagcatgca
tccccaaatgagcagctagctattgctggattaactggacaccacatagcagcaacggcg
ttgactttgcttggccggaatcgtgaagcccttcacttgatgtgctag
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