Malus sylvestris (European crab apple): 126633583
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Entry
126633583 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126633583
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126633583
Enzymes [BR:
msyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126633583
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126633583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-C3HC4_4
zf-RING_5
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
126633583
NCBI-ProteinID:
XP_050160209
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Position
8:complement(26939945..26943239)
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AA seq
185 aa
AA seq
DB search
MDGPPGGDLCSVCHGNFDTPCQANCSHWFCRNCIMLVWDHGSTVRPCKCPLCRRPITLLV
PSRASSRQLDRPEVAEILGKIERYNRVFGGHSRSLIQRGQDLPFLLRRLLRELINPDRSL
PLVIRARVWISMIMGAAYLFSPFDFIPEAIFGIAGLLDDFFIVLIVFFHVAAIYRSVLYR
RHGGS
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggacggccctccaggcggcgatctgtgttcggtgtgccatggcaacttcgacactcct
tgtcaggccaattgctctcactggttttgcagaaattgtattatgcttgtttgggatcat
ggatcaacagttcgcccttgtaaatgcccgctatgtcgtcgtcccatcactttgttggtt
ccaagtagggcttcttcaaggcagcttgataggccagaggttgcggagattttaggcaag
atagaaaggtacaatcgtgtttttggaggtcattccagaagtcttattcagagagggcag
gaccttccttttctcctgcggaggctgctgcgagaactaattaatcctgatagatctctt
ccccttgttataagggctcgtgtctggatttcaatgataatgggtgctgcgtacctattc
agcccttttgacttcatcccggaagcaatatttggtatagctggtctcctggacgatttc
ttcatagtgctcatcgtcttcttccacgttgctgccatttatcggtctgtactctatcgc
cgccatggaggttcctga
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