Malus sylvestris (European crab apple): 126634015
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Entry
126634015 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126634015
KO
K10891
fanconi anemia group D2 protein
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
126634015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msyl03400
]
126634015
DNA repair and recombination proteins [BR:
msyl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
126634015
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FancD2
DUF7578
FANCI_S2
DUF503
Nab2
Motif
Other DBs
NCBI-GeneID:
126634015
NCBI-ProteinID:
XP_050160456
LinkDB
All DBs
Position
9:10218367..10228472
Genome browser
AA seq
1497 aa
AA seq
DB search
MVFLHQQIPSRKRPPPSSSAPSCPPPKSSKPTATANSSNPTPNDAVETPDIDKMVSILAD
AGCTLLNHSGPPCLPSDLHKLRRHLHRTFSSSENASVLLSDFLSGLSSYINTPNNLRRIL
NASTRSESVLRHLLLVPTIQLQIQNMLLEKLPEYFHVYTQHSGPSLSLEDDVARLIINHF
RWLDFLVDPNALAEKLMQVLSICPLHLKKEIIGSLPEIIGDQNNKTVVEALEKLLQEDSA
VVVPVLDSFSNLNLDPMLQEQVTTIALSCIRTIEAEHMPHLLRFLLLSATPSNVRRIISQ
IRQQLKFVGVSNYRTSQQKLKGKSCADNTEASILDALRSSLRFKNILCQEILKELNSLEK
AQDHKVIDIWLLMLIYMNGESLQRSVEKLFKKKIIEDCIQEAMFDQCIHGHKELVQDYFL
SFISLSEYLLACKEQKSREFGMHIYVCLFEEFADMYSRQEVLGSLVTHVGSSVGFEVGSA
LETLALLASKYAQQLIPLSSHISGILDYLEGFSVENLHKVYEIFGHLALLARSSAESYGS
SFVNELLMIVRKQVTHPDLNYKKMGLVGTLKIVSCLGDATDVTCPSPSQKSNCDEALELL
KTSLDSCRQLPLPLIMFYDELTETLDCKSLHPTVIEWIGKHVGEFESLFLSDLDGGNLAV
KDSYCGLEGELWMNLDGDISPICLNILPLASSTLQSSSSLQVLPANFLLLAAIERLTNQG
SLGGIDALLGCPLHLPSSKYLFGSEWKSLTGKQKQIICASLFYAANWIRELLNAFCTQVT
GRFEFTSQATKEDILSKLMKRLRNLVFLESILNNCIERCSLSLPELHPYADIYRSSLLSQ
PHHMVNIEKKIEHKKTHEATSPRGMKKNKKTSKASTTSDTNGKLRQPTLFHVLEKAGVLT
GQEVPNEESSCLTSKSRSYESSEKNSSDSNEATAIEISAIAKAIYAQRFKFRPLLVHCYS
ILGFAKSEASCCLDAAAELPLYLYLLRDLHYKLYYLNPGKQLWGRGLSPPVGFTRMTVDE
FLSKVKPLFPSIKSHFDSALLVLTEGDETCEEHWNIQSTSAGNPDIPNLVHSKTAVSTSI
FKKVLHCFNAILNLPGIQTDKPALSYLLEAFQPTKIPDSFLEGIQLNLSPGTSEYLYFGA
YSFFEGVLDIACSLSFMLASESLFTLESIVSSVHKFISKMEGLGKNMHSGFVQEALPTLR
KKLGISAEKILKHRFDENLENGGKCKGEMVQKILRIYLENRDSTSDRLEQLACTILPEWT
KGEDDEHGFPSLSSGTFVVWYKILHEENLTVLNKLVKEAVLLKKARAGAQHNIIEKLLSK
LQQSVNVVVSLVNLCKTHDKVTLHAMAVGYGGKFIDSFMKVFDFLQSHFEVHREDIIHLV
LELQKATRTIQTLCSEAKGLRQTSITRKIPATKRSMERLLFSVKALLHTSSNGCTFWMGS
LKHKDLQGQVVSSQVYMDTEDENAGEESAEAADEEAAEATDDYQAENLDSEEDRETE
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atggtattcctccaccagcaaatcccttcccgcaaacggccgcccccctcttcttccgcc
ccttcttgccctccccccaaatcttctaaacccaccgccaccgcgaactcaagcaatcca
accccaaacgacgccgtcgaaaccccagacatcgataaaatggtctctattttagccgac
gctggctgtaccctcctcaaccactccggcccgccgtgcctcccttcggacctacacaag
ctccgccgccacctccaccgcaccttttcctcttccgaaaatgcctctgttcttctctcc
gatttcctctccggcctctcttcctacatcaacacacctaataacctccgcaggattctc
aacgcctccaccagaagcgagagcgtactccgccacttgctgttggtgcccactatccag
ttgcaaattcagaacatgcttctcgagaagcttccagaatatttccacgtgtatacgcaa
cattccggtccgtctctgtccctcgaagacgacgtcgctaggctgatcatcaatcacttc
cggtggctggattttcttgttgatccgaatgcattggccgagaaattgatgcaggttctt
tcgatttgccctctgcatttgaagaaagagataattggatcgttgccggagatcatcggc
gatcagaataacaagactgtggttgaagctctcgagaaattgcttcaggaggactcggct
gtagttgtgccggtgctcgattccttttcgaaccttaatttggatccaatgttgcaagaa
caggtaaccaccatagcattgtcatgcatcagaacaatcgaggcagagcacatgcctcat
ctgcttaggtttctactgctttcagcaacaccgtcaaatgtccggagaataatctcacag
attcgacagcagttaaaatttgttggggtatcaaattatcgcacatcacaacaaaaactc
aaaggaaagtcatgtgccgacaacaccgaggcttctatccttgatgccttgagatcaagt
cttcgatttaagaatatactgtgtcaggagattttgaaagaattgaacagcctagagaaa
gctcaggatcacaaagtcatcgatatatggttactaatgctgatatacatgaatggtgaa
tccctgcaaaggagcgtcgaaaagctattcaagaagaaaattattgaggattgcattcag
gaagctatgtttgatcaatgcattcatggacacaaagagcttgtacaggattattttcta
tctttcatttctctgtccgagtacttgttggcttgcaaggagcaaaaatccagggagttt
ggcatgcatatctatgtttgtctttttgaggagtttgccgatatgtattccagacaggaa
gttcttggctcgctagttacccacgtgggctctagtgtgggttttgaagttggttctgct
ttagagaccttggctttgctagcctccaaatatgcacagcagttaattcctctttcttct
catattagcggtattttggattacttagagggatttagtgttgaaaatctgcacaaggtc
tacgagatttttggccatctggcacttttggctcggtctagtgcagaatcttatggttct
tcctttgtgaatgaacttttgatgatagtacgcaagcaggtcactcatcctgatctgaac
tacaagaagatgggcctggttggaactctgaagattgtttcctgtctaggagatgcaact
gatgttacctgtccatccccatctcaaaaatctaattgtgacgaggcactggagctcttg
aagacttctttggactcttgcagacagctgcccttacctttgattatgttttatgacgaa
ctgactgaaacgttggattgtaaatcacttcatccaacagttatagaatggattgggaaa
catgtaggagagtttgaatccctgtttctgtctgatcttgatggtgggaatttggctgtt
aaggactcatattgtggtttagaaggggagctgtggatgaacttggatggtgatatatca
cctatttgtctaaacattttgccattggcttcctctacattgcagtcttcttcttcttta
caagttcttcctgctaacttccttttattagctgcaattgaaaggttgacaaaccaagga
tctcttggtggaattgatgcactacttggctgccctttgcacctgccttcatctaagtat
ttattcggatctgagtggaagtctctgacagggaagcagaaacagattatatgtgcgtct
ctattttatgctgccaattggatacgggaactactcaatgccttctgtacacaagttact
gggagatttgaatttacgagccaggccacaaaggaggatatactttccaagctaatgaag
cgcttgagaaaccttgtattcttggaaagcatattaaacaattgtattgagaggtgctct
ctatctcttcctgaacttcatccttatgctgatatttaccggtcttccctcttaagccaa
cctcaccatatggtgaacattgaaaagaaaattgagcataagaaaacacatgaggccacc
tctccaagaggcatgaagaaaaacaaaaagacctcaaaagcatcaacaacatcagatacc
aatgggaaactccggcagcccacattatttcatgtcttggagaaggcaggagttctaaca
ggccaagaggtgccaaatgaagaatcttcttgtttaacgtcaaagagcaggtcatatgag
tcatcagagaaaaattcttccgactctaacgaggctactgctatagaaatttctgccatt
gccaaggctatctatgctcagagatttaaattcagacctctgctggttcattgttattcc
attttggggtttgcaaagagtgaagcatcctgttgtcttgatgctgctgctgagttacct
ctatatctgtaccttctgcgtgatcttcactacaagctgtattacttaaatcctggaaaa
caattatggggcagaggcttgagtccgccagttgggttcaccaggatgacagtggatgaa
ttcttgagcaaagttaaaccactctttccaagtattaagagccattttgatagtgcactt
ttagtacttacggaaggtgatgaaacttgtgaagaacattggaatattcaatctacttct
gctggaaatccagacattcccaatcttgtacattcaaaaactgcagtttctacttcaata
ttcaaaaaagtgcttcattgtttcaatgcgatattaaaccttcctggtattcagacagac
aagccagctctctcatatctgctagaagcattccagcctaccaagatcccagatagtttt
ttggaagggatacagcttaacctttcccctgggacttcagaatatttatattttggcgct
tattcattttttgaaggcgtcttggacatagcctgctctctctcttttatgctggcgtca
gagtcactttttactctagaatcaattgtatcatcggtccacaaattcatcagcaagatg
gagggacttggtaaaaacatgcactcaggatttgtccaggaggctcttcctactttgcgc
aagaaacttggtatttctgccgagaagattttaaagcatagatttgatgaaaatcttgag
aatggtgggaagtgcaaaggggaaatggtacagaaaatattgcgcatttacctagaaaat
agagattccacttctgatcggctggaacagctagcctgcactattttgcctgagtggaca
aagggagaagatgatgaacatggtttcccatctctaagttctggaacatttgttgtgtgg
tacaagatactgcatgaagagaacctaactgttcttaacaaattggtcaaggaagctgtt
cttctgaagaaagcgagagctggtgctcaacataacattattgaaaagcttctaagcaag
ctacaacagtctgtaaatgtggttgtgtcattagttaacctttgtaaaactcatgataag
gtgactttgcatgccatggctgttgggtatggtgggaagttcattgattccttcatgaaa
gtttttgacttcttacagtcccattttgaagttcacagagaggatataatccacttggtt
ttagagcttcaaaaggccacaagaacaatacagaccctatgttcagaagcaaagggtttg
aggcaaacaagcattaccagaaaaattcctgctacaaagagatctatggaacgccttttg
ttctctgtgaaagctcttctccacacatcctcaaatggatgtactttctggatgggcagt
ctgaagcataaagacttgcagggtcaggtggtgagttcccaagtgtatatggatactgag
gatgagaatgctggtgaagaatcagcagaagccgctgatgaagaagcagcagaagcaact
gatgattatcaagctgagaatcttgatagtgaggaggacagagaaacagaatga
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