KEGG   Malus sylvestris (European crab apple): 126634137
Entry
126634137         CDS       T09027                                 
Name
(RefSeq) autophagy-related protein 13b
  KO
K08331  autophagy-related protein 13
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    126634137
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:msyl04131]
    126634137
   03029 Mitochondrial biogenesis [BR:msyl03029]
    126634137
Membrane trafficking [BR:msyl04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    126634137
   Atg1 complex
    126634137
Mitochondrial biogenesis [BR:msyl03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    126634137
SSDB
Motif
Pfam: ATG13
Other DBs
NCBI-GeneID: 126634137
NCBI-ProteinID: XP_050160615
LinkDB
Position
1:complement(2656499..2660189)
AA seq 637 aa
MASSHGNTNSEAAKVMEQIITEFYAKSLHIILESRTPYMSSRNFSGERTLSSPSSSSSSS
SSVRPRDKWFNLALKECPAALENLDLFCSQGHFEPVVVDVIMVQRPLDCDLVKCSPKRDL
TRNSSLKERYPYCWNYEQDEFGCDAKSEKIIERWVVQYENRKIRDTNSGSRRSSNNNLST
LYKKSMLLLRSLYVTVRLLPAYKVYRDLISSGQIWPFAITHRVSSFAENFTCREEAEMQR
FGFTPVDTAGGRLCLSVLYCLSLSDVSSEPSTPMSSQLIPDYVGSPLTDPLKRFPSLPVT
GTVAHAHPSSSPFSRRHSWSFDHYRASPPSVSFSPSPTYSEPHTLISNPGTRRFQPKTLP
PHPPETSHVHKKDSTFDEYCPSPAVSPSQSSAAPSLPIFIPGSHPSKPLLQSESAPVSEP
AAKLANFPAYSNKLNFPVRGTGSGSFKSCKTTGFSQPGTAVEKLFSFGKDEARQYSGVKS
SSSSRSFPDDFDDTEFPCPFDVDDDDVTDPGSRPESFDKHVPLCEPHEFEGLFTIKKSQD
AAVGALVQMLRKAPPLRQDHSNSVNLSQAGRPEIWSNCSQEPNRSSEGQASVQRAGSSSI
VSSGLISSKTTADALRELQGYRDMKNSLIGKGSKPHI
NT seq 1914 nt   +upstreamnt  +downstreamnt
atggcatcttctcatggcaatacaaactctgaagcagcaaaagtaatggaacaaataatc
actgaattctatgccaaaagtctccacataatccttgaatccaggactccatatatgtcc
tcgcgtaattttagtggtgaacgaaccctatcatcgccgtcctcatcctcatcatcctca
tcgagtgtgaggccgagggataagtggtttaatctagctcttaaggaatgccctgctgca
ctggagaatcttgatctcttctgcagccagggccattttgaacctgtggtggttgatgtg
attatggttcagagaccacttgattgtgacctggtgaagtgttcacctaaaagggatctt
actaggaactcgtcattgaaagagcgttatccatactgttggaattatgagcaggacgaa
tttgggtgtgatgcaaagagtgaaaagattattgagagatgggttgtgcagtatgagaat
cggaagatcagagacacaaattcaggaagcaggaggtcgagcaataataatttgtctaca
ttgtataagaaatcaatgttacttttgagatctttgtatgtcactgttaggctattacct
gcgtacaaagtttatcgcgacctcatttcatctggacaaatttggccatttgctatcact
caccgggtatcctcttttgctgagaacttcacttgtagagaagaagcagaaatgcagcgg
ttcgggttcacccctgtggatacagctggtggcaggctttgtctttctgtattgtattgt
ttatcactttcagatgtaagctctgaaccatcaactcctatgtcttcacaacttattccg
gactatgttggcagcccattgacagaccctcttaaaaggttcccatcacttcctgttaca
ggaacagtagcacatgcccatccatcatcgtccccattctcaaggcggcatagttggagt
tttgaccattatagagcttcaccaccttcagtttctttctcaccttcacctacatattca
gaaccacatactttgatttctaatccaggtactcgtcgttttcaaccaaaaaccttgcca
cctcatccgcctgaaacatctcatgttcataaaaaggattcaacctttgatgagtattgt
ccttcacctgccgtttctccctcacaatcctcagctgcaccgtcattgccaatctttatt
cctgggagtcatccttcaaagcctcttttacaatctgagagtgcaccagttagcgaaccg
gcggctaaacttgctaatttccctgcatattccaacaagctaaattttcctgtaagagga
actggatctggaagttttaagagttgtaaaactacaggttttagtcagcctggtactgcg
gttgagaagttgttttcttttgggaaagatgaagctagacaatattctggggtgaaatcc
agcagctccagtaggtcttttcctgatgattttgatgatactgagtttccttgcccattt
gatgtggatgatgatgatgtgacagatccaggcagcagacctgaatcttttgacaaacat
gtacccctatgtgagccacatgagtttgaagggttgtttacaattaaaaaatcccaagat
gctgctgttggggcgcttgtacagatgttaaggaaagctccacctctccggcaggatcac
tcgaattcagtaaatttgtcacaggcaggcaggcctgaaatctggagcaactgtagccaa
gagcctaatcggtcttctgagggacaggcatcagttcagcgtgctggttcgtcaagcatc
gtttcatctgggctcatatcatcaaaaactactgccgatgcattacgagagctccagggt
tacagggacatgaaaaactcgttaatcgggaaaggcagtaagcctcacatctag

DBGET integrated database retrieval system