Malus sylvestris (European crab apple): 126634137
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Entry
126634137 CDS
T09027
Name
(RefSeq) autophagy-related protein 13b
KO
K08331
autophagy-related protein 13
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
126634137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126634137
03029 Mitochondrial biogenesis [BR:
msyl03029
]
126634137
Membrane trafficking [BR:
msyl04131
]
Autophagy
Autophagosome formation proteins
ULK complex
126634137
Atg1 complex
126634137
Mitochondrial biogenesis [BR:
msyl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
126634137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
126634137
NCBI-ProteinID:
XP_050160615
LinkDB
All DBs
Position
1:complement(2656499..2660189)
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AA seq
637 aa
AA seq
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MASSHGNTNSEAAKVMEQIITEFYAKSLHIILESRTPYMSSRNFSGERTLSSPSSSSSSS
SSVRPRDKWFNLALKECPAALENLDLFCSQGHFEPVVVDVIMVQRPLDCDLVKCSPKRDL
TRNSSLKERYPYCWNYEQDEFGCDAKSEKIIERWVVQYENRKIRDTNSGSRRSSNNNLST
LYKKSMLLLRSLYVTVRLLPAYKVYRDLISSGQIWPFAITHRVSSFAENFTCREEAEMQR
FGFTPVDTAGGRLCLSVLYCLSLSDVSSEPSTPMSSQLIPDYVGSPLTDPLKRFPSLPVT
GTVAHAHPSSSPFSRRHSWSFDHYRASPPSVSFSPSPTYSEPHTLISNPGTRRFQPKTLP
PHPPETSHVHKKDSTFDEYCPSPAVSPSQSSAAPSLPIFIPGSHPSKPLLQSESAPVSEP
AAKLANFPAYSNKLNFPVRGTGSGSFKSCKTTGFSQPGTAVEKLFSFGKDEARQYSGVKS
SSSSRSFPDDFDDTEFPCPFDVDDDDVTDPGSRPESFDKHVPLCEPHEFEGLFTIKKSQD
AAVGALVQMLRKAPPLRQDHSNSVNLSQAGRPEIWSNCSQEPNRSSEGQASVQRAGSSSI
VSSGLISSKTTADALRELQGYRDMKNSLIGKGSKPHI
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttctcatggcaatacaaactctgaagcagcaaaagtaatggaacaaataatc
actgaattctatgccaaaagtctccacataatccttgaatccaggactccatatatgtcc
tcgcgtaattttagtggtgaacgaaccctatcatcgccgtcctcatcctcatcatcctca
tcgagtgtgaggccgagggataagtggtttaatctagctcttaaggaatgccctgctgca
ctggagaatcttgatctcttctgcagccagggccattttgaacctgtggtggttgatgtg
attatggttcagagaccacttgattgtgacctggtgaagtgttcacctaaaagggatctt
actaggaactcgtcattgaaagagcgttatccatactgttggaattatgagcaggacgaa
tttgggtgtgatgcaaagagtgaaaagattattgagagatgggttgtgcagtatgagaat
cggaagatcagagacacaaattcaggaagcaggaggtcgagcaataataatttgtctaca
ttgtataagaaatcaatgttacttttgagatctttgtatgtcactgttaggctattacct
gcgtacaaagtttatcgcgacctcatttcatctggacaaatttggccatttgctatcact
caccgggtatcctcttttgctgagaacttcacttgtagagaagaagcagaaatgcagcgg
ttcgggttcacccctgtggatacagctggtggcaggctttgtctttctgtattgtattgt
ttatcactttcagatgtaagctctgaaccatcaactcctatgtcttcacaacttattccg
gactatgttggcagcccattgacagaccctcttaaaaggttcccatcacttcctgttaca
ggaacagtagcacatgcccatccatcatcgtccccattctcaaggcggcatagttggagt
tttgaccattatagagcttcaccaccttcagtttctttctcaccttcacctacatattca
gaaccacatactttgatttctaatccaggtactcgtcgttttcaaccaaaaaccttgcca
cctcatccgcctgaaacatctcatgttcataaaaaggattcaacctttgatgagtattgt
ccttcacctgccgtttctccctcacaatcctcagctgcaccgtcattgccaatctttatt
cctgggagtcatccttcaaagcctcttttacaatctgagagtgcaccagttagcgaaccg
gcggctaaacttgctaatttccctgcatattccaacaagctaaattttcctgtaagagga
actggatctggaagttttaagagttgtaaaactacaggttttagtcagcctggtactgcg
gttgagaagttgttttcttttgggaaagatgaagctagacaatattctggggtgaaatcc
agcagctccagtaggtcttttcctgatgattttgatgatactgagtttccttgcccattt
gatgtggatgatgatgatgtgacagatccaggcagcagacctgaatcttttgacaaacat
gtacccctatgtgagccacatgagtttgaagggttgtttacaattaaaaaatcccaagat
gctgctgttggggcgcttgtacagatgttaaggaaagctccacctctccggcaggatcac
tcgaattcagtaaatttgtcacaggcaggcaggcctgaaatctggagcaactgtagccaa
gagcctaatcggtcttctgagggacaggcatcagttcagcgtgctggttcgtcaagcatc
gtttcatctgggctcatatcatcaaaaactactgccgatgcattacgagagctccagggt
tacagggacatgaaaaactcgttaatcgggaaaggcagtaagcctcacatctag
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