KEGG   Malus sylvestris (European crab apple): 126634461
Entry
126634461         CDS       T09027                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
msyl  Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:msyl03036]
    126634461
   03400 DNA repair and recombination proteins [BR:msyl03400]
    126634461
Chromosome and associated proteins [BR:msyl03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    126634461
DNA repair and recombination proteins [BR:msyl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     126634461
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ
Other DBs
NCBI-GeneID: 126634461
NCBI-ProteinID: XP_050160944
LinkDB
Position
9:18471972..18483272
AA seq 1146 aa
MAGPTDLIRHIESYVDTSCSPSQQAASLNSIITLVKNDLLTIEVLVKEMGMYLTTTDNVI
RARGILLLAEVLTGLASKPLDTATIHSLIGFFTDRLADWRALRGALVGCLALLRRKASAG
MVCASDAKVVAQTYVESLQVQALGQHDRKLCFELLQCLLVRHPNEVASLGETFFYGICQA
MDGEKDPHCLMLTFPIVEALVQIYPDPSGSLESFCEDLFTLLGCYFPIHFTHLKDEDSDV
KRDDLSKALMSALSSTPLFEPFVIPLLLEKLSSSLPLAKVDSLKYLNHCTAKYGADRMAK
HAETIWISVKHAISNSLEKPAISFTEEPLYGLGFQENEVATEALMLLEKVTMQNEVLFVN
LIVRDEDINTVFNSIASYENYNIPLQGKQRLHAVGRILYKITKTSAASCKGVFESFFPCL
MNTLEISVRNSSGDCSLNENSFSSKRFNFGALYLSVELIEACRDLIMRFKDLAPKPDTTH
ATCCYMLQSFADSLIIAFCSSLATHLNEVHGAEIYFTVKGLQMLATFPGDILPISKIIFE
NILTELMSIILVDFNKTLLWKLALKALVHIGSFVDAYHESEKALSYIVLVVEKTLSLVSH
DDFNVPFPLKLETVSEIGASGLNHMLRIVQGLEEAIVGKLSDYVHGKLNLAEGTIQLLEC
YCNKILPWIKETGGLEEVLLRFVINIWNATESCKDFSIQVQEEELLDAAMMAMKLAVGSC
SDESQKIMVDKAYSVLSSNISIPFKESMDATSSIQLQELHVSEQRDTFSHRDEWIVSLFA
SIIIAVHPKTQIANLKGLLHLFMTTLLKGCVPVAQALGSVINKLGTKSKDTENSKDCTLE
EAIDMIFGTNIWSFNENGVLKTSGTSNGIKVSLTDLCLGFSSNKQLQVRALEGLAWIGKG
LLLLGHEKVKDVTKIFLECLLSEGRKRAMELQQGLENSYEQHFVMRTAADAFHILMSDSE
VCLNRKFHAITRPLYKQRFFSSVMPILQSMIINSDSSLSRSMLVRASAHLISNAPLIAIL
SEAEKLMPIMLDGLSVLSEDILDKDKLYSLLLVLSGILTDKNGKVAVVENAHILINCLTR
LIGYPHMMLVRETAIQCLVATSELPYARIFPMRTQVLQAISKALNDPKRAVRQEAVRCRR
AWASIA
NT seq 3441 nt   +upstreamnt  +downstreamnt
atggccggacctaccgatctgattcggcacattgaatcgtacgtcgacacgtcttgctct
ccttcccagcaggctgcgagcttgaattcgatcattacgctcgtgaagaatgacctttta
actatcgaagtgctggtgaaagagatggggatgtatttgaccactacggataatgtcatc
cgtgctcgaggtatccttcttttggcagaagttctaacgggtctggcatcaaaaccacta
gatactgcaactattcatagcttgataggattcttcacagacagactggcagattggaga
gctttacgtggtgcacttgtcggttgcttggcactactgaggaggaaagctagtgctgga
atggtctgtgccagtgatgcaaaagttgttgctcaaacttatgtagagtccctacaggtg
caagctttagggcagcatgacagaaagctctgctttgagctattgcaatgccttttagtg
cgccatcccaatgaagttgcttcactgggtgaaacctttttctacgggatctgtcaagca
atggatggagaaaaagatcctcattgcttaatgttaacatttcctattgttgaggctttg
gtgcaaatatatccagacccatctggctcacttgaaagtttttgtgaagatctctttaca
ttattgggatgttactttcccattcattttactcatctgaaagatgaggactctgatgtg
aaaagagatgacctctcgaaggcactaatgtcagcgttgtcgtccacacctttattcgag
ccatttgtcattccattgcttcttgagaaactttcttcatctctgccattagcaaaggtt
gattctttgaaatatcttaaccactgcacagctaaatatggagctgacagaatggcaaaa
catgctgaaactatctggatttcagtgaaacatgccataagtaattctttggaaaagcct
gctatatcctttactgaagaaccactatatggtcttggctttcaagagaatgaagttgca
acagaagctctaatgcttctagaaaaggttaccatgcaaaatgaggtgttgtttgtaaat
ttaattgttcgtgatgaagatataaacacagttttcaactccatcgctagctatgaaaat
tataatattcctttgcaaggcaagcaaaggttacatgcagtcggtcgtatcctttataag
ataacaaagacttctgctgcttcctgtaaaggtgtgtttgaaagtttcttcccttgccta
atgaacactctcgagatttctgtgagaaattcatctggggattgctctcttaatgagaat
tctttttcctcaaaaagatttaattttggagctctttatctctctgtggaactcattgag
gcatgcagagatttaattatgagattcaaagaccttgctccgaagcctgatactacacat
gcgacatgttgctacatgcttcagagctttgcggattcactaatcattgccttttgttct
tccttggccacacatcttaatgaagttcatggtgcagagatttatttcacagtcaagggt
ttacagatgctggctacattccctggagatatcttgccaatatcaaaaattatatttgag
aatattctgacggaactcatgtcaatcatcttagtggatttcaacaagacattgctatgg
aagctagcattgaaggctttagtgcacattggctcatttgtggatgcatatcacgagtcc
gagaaggcactaagctatatagtccttgttgttgaaaagacactttcattggtgtctcat
gatgatttcaatgtgccttttccactaaaactggagacagtctctgagattggtgcaagt
gggctaaatcatatgctaagaattgtacaagggcttgaagaggccatagttggcaagtta
tctgattatgtccatggaaaattgaacttggctgaagggacaattcaacttttggaatgc
tactgtaataagattcttccatggatcaaggaaactggaggtcttgaggaagttctgttg
cggtttgtcattaacatttggaatgccactgaaagttgtaaagattttagcattcaagtc
caggaagaagagcttcttgatgcagccatgatggcaatgaagcttgctgttgggagctgt
tcagatgaaagccagaagattatggttgacaaggcttacagtgttctttcatcaaacata
tccattccatttaaggaatccatggatgcaacctcttcaatccaacttcaagaattgcac
gtttctgaacagagagacacattctctcatagagatgaatggattgtttcactatttgca
tcaataatcatagcggtgcatccaaaaacacagattgcaaatctgaaagggctattgcat
ttgtttatgacaacccttcttaaaggttgtgttccagtagctcaggcgttaggttctgtg
atcaataaattgggtacaaagtccaaggacacggagaattcaaaggactgtaccctggaa
gaagcgattgatatgattttcggaacaaatatatggagtttcaatgaaaatggagtttta
aagacatctggaacaagtaatggcataaaagtgagtcttactgatctatgccttggtttt
tcgagcaataagcagcttcaagtccgtgccctggaaggattagcatggataggaaaaggt
ttgcttctacttggtcatgaaaaagtaaaagatgtaaccaaaatttttttggagtgctta
ctgtcagaaggcagaaaacgtgccatggagttacagcaaggtctagaaaacagttatgag
cagcattttgtgatgagaaccgctgcagatgcatttcacattcttatgagtgattctgaa
gtttgtttgaaccgaaaatttcatgccataacacggccactctacaaacagcggtttttc
tcttcggtgatgcctattttgcagtctatgataataaattctgattcatcattatccaga
tctatgctggttcgggcatctgcacaccttatatctaatgcccctttaattgctatcttg
agtgaagcagagaagctcatgccgataatgttggatgggttgtccgtgttaagtgaggat
attctggataaagacaagctatacagtcttttgctagttctttctggaatattgacagat
aaaaacggaaaagtagctgtcgtagagaatgcacatattttaattaattgtctcaccaga
ctcattggctacccgcatatgatgcttgtccgagagactgcaattcaatgtcttgttgca
acgtctgagctgccctatgcaagaatctttcccatgagaacacaggtactacaagcaata
tccaaagctcttaatgatccaaagagggctgttcgtcaagaagctgtcaggtgtcgacgg
gcatgggcgtcaattgcataa

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