Malus sylvestris (European crab apple): 126634467
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Entry
126634467 CDS
T09027
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126634467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126634467
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
126634467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
126634467
NCBI-ProteinID:
XP_050160950
LinkDB
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Position
9:complement(9096979..9123388)
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AA seq
482 aa
AA seq
DB search
MQSDSGKLFIGGISWDTNEERLKEYFSSFGDVVEAVIMKDRTTGRARGFGFVVFSDPAVA
DSVIMEKHNIDGRMVEAKKAVPRDDQNILGRSSGSIHGSPGPGRTRKIFVGGLASTVTES
DFKKYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKR
AVPKELSPGPSRSPIGGYNYGLSRVNSFLNGYTQGYTPNTGGGYGLGRFSPVAGGRSGFP
PFGSGYGIGMNYEPGLSPGFGGNANYNNNNNNNMNYGRGGLSPYYINNSNRFSNPIGYDG
GNGGNTSSFFSSMSRNLWGNGGGGPDGLNSTNSNAYIGSGSGTIGGSTFGNTGANWPSSA
MSAQGGGNNVSNNSRNLGYGVGDNSYGLGTGGYGRNSGASVPPASSFAASNGGFDGSLAD
FYSSNSIYGDPTWRSSNSERDGSVPFGYELGGTASDVSAKSSPGYVGGYSVNKRQSNTGI
AA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccgatagtggtaagttatttattggcggcatatcttgggatacaaatgaagag
cgtctgaaagagtatttcagtagttttggggacgtggtagaagcagtgatcatgaaagat
cggaccacaggccgtgctcgtggtttcggttttgtagttttttctgacccagcagttgcg
gacagcgtcataatggagaagcacaacattgatggaaggatggttgaggccaaaaaggct
gttcctagggatgaccaaaacatattgggtagaagcagtggcagcatccatggttctcca
ggtcctggccgcacaagaaagattttcgttggaggtttagcgtccactgtcacagagagt
gacttcaagaagtattttgagcagtttgggacaatcacagatgttgtagtgatgtatgat
cacaacacccagagaccaagaggctttggattcatcacttatgattcagaagaggcagtg
gacaaggttttgcttaaaacatttcatgaactgaacgggaagatggttgaagtcaagcgt
gcagttcccaaagagttatcacctggccccagtcgtagccctattggtggatacaactat
ggtctgagtagggtcaatagcttccttaatggctacactcaggggtatactccaaataca
ggtggaggctatggacttggtagattcagtccagttgctggtggtcgtagtggatttcct
ccatttggttctggttatggaattggtatgaattatgagccaggcttgagcccaggtttt
ggagggaatgcaaattataataataataataataataatatgaactatggacggggtgga
ttgagtccttattatatcaataattcaaataggtttagcaatcccattgggtatgatggt
ggtaatggaggaaacacatcttcgtttttcagctcaatgtctcggaacttgtgggggaat
gggggtggtggacctgatggtcttaactccacaaattctaatgcttacatcggatcagga
agtgggaccattggaggaagtacatttggaaatactggagctaattggccatcttcagca
atgtcagctcaaggcggaggaaataatgtttctaataatagcaggaatcttggttatgga
gttggggataacagttacggtctgggaactggaggttatggaagaaacagtggtgcaagt
gtgccccctgcatcttcatttgctgcatcaaatggtggtttcgatgggtccttggctgac
ttttacagcagtaattcaatttatggagaccctacttggagatcatcaaattccgagcga
gatgggtctgttcctttcggttatgagcttggcggcacagcttcggatgtttcagctaag
agttctcctggttatgtgggtggttatagtgttaataagagacagtcaaacacaggaatt
gctgcctag
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