Malus sylvestris (European crab apple): 126634468
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Entry
126634468 CDS
T09027
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126634468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126634468
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
126634468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
126634468
NCBI-ProteinID:
XP_050160954
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Position
9:complement(9096979..9102696)
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AA seq
481 aa
AA seq
DB search
MQSDSGKLFIGGISWDTNEERLKEYFSSFGEVVEAVIMKDRTTGRARGFGFVVFSDPAVA
DSVIMEKHNIDGRMVEAKKAVPRDDQNILGRSSGSIQGSPGPGRTRKIFVGGLASTVTES
DFKKYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLLKTFHELNGKMVEVKR
AVPKELSPGPSRSPLAGYNYGLSRVSSFLSGYTQGYNPSTVGGYGLGRFSSVAGGRSGFP
PYGSGYGIGMNYEPGLSPGFSGNANFNSTMSYGRGLSPYYINNSNRFSSPVGYDGGNGGN
TSSFFSSVTRNLWENGNGNEGGLNYGTNSTNANSYIGSGSGTIGGSTFGNTGNNWPSSAM
SAQVGGNNVSNNSRNLGYGVGDNSYNLGTGGYGRNSGASVAPTSSFAASNGGFDGTFTDF
YSSGSVYGDPTWRSSNSDRDGPGPFGYGLGGAGSDVSAKSSPGYVGGYSVNKRQPNTGIA
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccgatagtggtaagttgtttatcggcggcatatcttgggatacaaatgaggag
cggctaaaagagtatttcagcagtttcggggaggtggtagaagcagtgataatgaaggat
cggaccacaggccgtgctcgtggttttggttttgtagttttttctgacccagctgtggcg
gacagtgtcataatggagaagcacaacatcgatggaaggatggttgaagcgaaaaaggct
gttcccagggatgaccagaatattttgggtagaagcagtggcagcatccagggttctcca
ggtccaggtcgcacaagaaagatttttgttggaggtttagcatccactgtcacggagagt
gactttaagaagtactttgaacagtttggaacaatcacggatgttgtggtgatgtatgat
cacaacacccagaggccgagaggctttggattcatcacttatgattcagaggaggcagtg
gacagggttttgcttaagacatttcatgaactgaacgggaaaatggttgaggtaaagcga
gcagttccgaaagagttatcacctggtcccagtcgcagccctcttgcaggatacaactat
ggtctcagtagggtcagtagcttccttagtggctacactcaggggtataatccaagtaca
gttggaggctatggccttggtagattcagttcagttgcaggtggtcgaagtggatttcct
ccatatggttctggttatggaattggtatgaattatgagccaggcttgagtccaggattt
agtggaaatgcaaattttaatagtactatgagctatgggcggggtttgagtccttattat
atcaataattcaaataggtttagcagccccgttgggtatgatggcggtaatggaggaaac
acatcttcgtttttcagctcagtgactcggaacttgtgggagaatgggaatgggaatgag
ggtggtcttaattatggaacaaactccacaaatgccaattcttacatcggatcaggaagt
gggaccattggaggaagtacgtttggaaatactggaaataattggccttcttcagcaatg
tcagctcaagtcggaggaaataatgtttctaacaatagcaggaatcttggttatggagtt
ggggataacagttacaatctgggaactggagggtatggaagaaacagtggtgcaagtgtg
gcccctacatcttcatttgctgcatcaaatggtggttttgatgggaccttcactgacttt
tacagtagcggttcagtatatggagatcctacttggcgttcatcaaattccgatcgagat
ggacctggtccctttggttatgggcttggcggtgcaggctctgatgtatcagctaaaagt
tctcctggttatgttggtggttatagtgttaataagagacagccaaatacaggaattgct
gcctag
DBGET
integrated database retrieval system
