Malus sylvestris (European crab apple): 126634534
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Entry
126634534 CDS
T09027
Name
(RefSeq) probable alpha-mannosidase At5g13980
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
126634534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126634534
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
126634534
Membrane trafficking [BR:
msyl04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
126634534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
COMMD9_HN
Motif
Other DBs
NCBI-GeneID:
126634534
NCBI-ProteinID:
XP_050161004
LinkDB
All DBs
Position
9:277235..285429
Genome browser
AA seq
1024 aa
AA seq
DB search
MAATPSLLCLLTLLVGFLVVDSKFIAYNTSQGIVPGKINVHLVPHTHDDVGWLKTVDQYY
VGSNNSIQGACVQNVLDSLVPALLADKNRKFIYVEQAFFQRWWRDQSDSVQSIVKQLVTS
GQLEFINGGMCMHDEAATHYIDMIDQTTLGHQFIKREFDVTPRIGWQIDPFGHSAVQAYL
LGAEVGFDSLFFGRIDYQDRAKRKIEKSLEFVWRGSKSLSSSAQIFSGAFPENYEPPSGF
YFEVNDNSPIVQDDITLFDYNVQDRVNDFVAAAVAQANITRTNHIMWTMGTDFKYQYALT
WFRQMDKLIHYVNKDGRVNALYSTPSIYTDAKYATNESWPIKTDDFFPYADRTNAYWTGY
FTSRPALKHYVRAMSGYYLAARQLEYFKGRTGSGPNTDSLADALAIAQHHDAVTGTEKQH
VANDYAKRLAIGYTEAEQVVATSLAHLVESASYTGSVDPTTKFQQCPLLNISYCPASEVN
LSQGKQLVVVVYNSLGWKRDDVIRIPVINEDVTVHDSEGREIESQLLPLDDAHVGLRNYH
AKAYLGQTPTKTPNYWLAFTVSVPPLGFSTYTISAAKGAGAGSTRSSVQTFQSREESTIE
VGQGNVKLTFSTNQGKLTNYVNRRSLVEELVEQSYSFYNGYNGSDDKAPLIPQNAGAYIF
RPNGTFLIKPGEKASLTVVRGPVIDEVHQHINSWIYQVTRIHKEKEHVEVEFIVGPLPTD
DGIGKEVVTQLATTMATNKTFYTDSNGRDFIKRIRDYRTDWDLKVHQPIAGNYYPINLGI
YMQDISTEFSVLVDRSVGGSSTVDGQIELMLHRRLLLDDSRGVAEALNETVCIDNVCSGL
RIQGKFYFRIDPLGEGAKWRRTFGQEIYSPLLLAFSEQDGDNRKNSHVTTFSGVGSSYSL
PDNVALITLQELDDGKVLLRLAHLYEIGEDRDLAVMTNVELKQLFPKKKIGKLTEMNLSA
NQERTEMEKKRLNWKVEEGSSSEAKVSRGGPVDPTKLVVELAPMEIRTFLVEFDESFHRY
LFDA
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgactccgtccctcttgtgcttgcttacgttgctcgtcggatttctagtcgtc
gactccaagtttattgcatacaacacttcccaaggcatagtccccggcaaaatcaatgtc
catttggtccctcacacccacgacgacgttggctggttaaagaccgttgatcagtattat
gttggctccaacaattccatccagggggcttgcgtgcaaaatgtgttggattctttggtt
cctgctctgctggctgacaagaatcgcaaattcatttatgtcgaacaggcattcttccag
cggtggtggagagatcagagtgactccgtccagagtatagtcaagcagctagtcacctcg
ggtcaattagagttcataaatgggggaatgtgcatgcatgatgaggctgcaacacattat
attgatatgatagatcagacgactctagggcatcagtttattaaaagggaatttgatgtg
actccaagaattggttggcaaattgacccatttgggcattcggctgtccaggcttacttg
ttgggagcagaagttggatttgactcacttttcttcgggcgaatagattaccaggacagg
gctaagcgcaaaattgagaagagccttgaatttgtttggcggggttcgaagagtctcagt
tcatctgctcagattttttctggtgcattcccagagaactatgagcctccatctggtttc
tactttgaagttaatgataattccccaattgttcaggatgacatcactttgtttgattac
aatgttcaagatcgtgttaatgactttgttgctgctgcagtagcacaggctaacataact
cgaacaaatcatataatgtggaccatgggaacagatttcaagtatcagtatgcactcaca
tggttccgacaaatggacaagctcattcattatgtcaacaaggatggacgtgttaatgct
ctgtattctactccatccatatatacggatgcaaagtatgctacaaatgaatcatggcca
atcaagacagatgatttctttccttatgcagatcgtacaaatgcttactggacagggtac
ttcacaagtagaccagccttgaaacattacgttagagcaatgagtggctattatttggct
gccaggcaactagaatattttaaaggaaggactggttcagggcccaacacagactcgttg
gcagatgccttagcaattgctcaacatcatgatgcagtcactggtacagagaagcagcat
gttgccaatgattatgcaaaaaggttggcgataggctacacggaggccgagcaagtagtt
gccacgtcacttgctcacttggttgagtctgcatcatacactggatctgtagatccaact
acaaagtttcaacagtgcccacttctaaatatcagctactgccctgcatcagaagtgaat
ttatcccaagggaagcaattggttgtcgtggtgtacaattcccttggatggaagagggat
gatgtaattcgaattcctgttatcaatgaagatgtcactgttcatgattctgagggaaga
gaaattgaatcacagcttctcccactagatgatgcccatgtgggcttaaggaactaccat
gctaaggcatacttgggtcaaacaccaacaaagacaccaaactattggcttgcatttaca
gtatccgtgccaccacttggtttcagcacatacactatctcagctgccaaaggagcaggt
gctggttccaccagatcatctgtacagacatttcaaagtagggaagagtccactattgaa
gttggtcaaggaaatgtgaaactcacgttttctacaaatcaaggcaaactgaccaattat
gtcaatagaagaagcttggttgaagaattggtcgaacagtcttacagtttttataacgga
tataatggcagtgatgataaagctcctctgattcctcagaatgctggggcttatatcttc
cgtccaaatggcacgtttctcataaaacctggagaaaaggcttctctgactgtcgtgcgt
ggaccagtaatagatgaagtacatcaacatattaattcatggatatatcaggtcaccaga
attcacaaagagaaggagcatgttgaagtcgagtttattgttgggccattacctactgat
gacggaattggaaaagaagtagtaactcaactggccactaccatggctaccaacaaaacg
ttctacactgattctaatgggcgtgattttattaaaaggattcgcgactatagaacagat
tgggacctgaaagtgcaccaacctatagctggaaattattatccaattaatcttgggata
tacatgcaagatattagtacagaattttcggttttggtggaccgatctgtaggagggtcc
agcacagtggatggacagatagagttgatgctccacaggagactactgcttgatgactca
agaggtgtggcagaggctctaaatgaaactgtctgtattgacaacgtttgcagtggacta
agaatccaaggaaaattttatttcagaatcgatcccctgggagaaggtgccaagtggcgt
cgtactttcggtcaggagatatattcccctcttttactagctttttctgaacaggatgga
gataaccggaagaattctcatgtaaccacgttttcaggggttggttcctcatacagttta
cctgataatgtcgctcttataactcttcaggagcttgatgatggaaaagttctcctccga
ttagcacatttatatgagattggagaggacagggatcttgctgtaatgacaaatgtagag
ttgaagcagctcttccccaagaagaagattggtaaacttacagagatgaacttgtcggca
aatcaagaacggacagaaatggagaaaaagagactcaattggaaggtggaagaaggctct
tcatcagaagcaaaggtttcgaggggtggacctgttgatcctacgaaactggttgtggaa
cttgcaccaatggaaatccgaacctttcttgttgagtttgacgaaagcttccatcgttat
ttatttgatgcctaa
DBGET
integrated database retrieval system
