Malus sylvestris (European crab apple): 126634535
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Entry
126634535 CDS
T09027
Name
(RefSeq) alpha-mannosidase At3g26720-like isoform X1
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
126634535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126634535
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
126634535
Membrane trafficking [BR:
msyl04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
126634535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
Glyco_hydro_57
Motif
Other DBs
NCBI-GeneID:
126634535
NCBI-ProteinID:
XP_050161005
LinkDB
All DBs
Position
9:261872..276782
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AA seq
1023 aa
AA seq
DB search
MASTAAALFLFTAVTAVLLAGLPGAKSEYIAYNTTAGIVPGKINVHLVPHSHDDVGWLKT
VDQYFVGANNSIRGACVQNVLDSVISALLEEKNRKFIYVEIAFFQRWWRQQSPALKAKVK
ELVSSGQLEFINGGMCMHDEATPHYMDLIDQTTLGHQFILKEFGQVPRIGWQIDPFGHSA
VQAYLLGAELGFDSLFFARIDYQDRAKRLRDKTLEFIWQGSRSLASSSQIFTGIFPRHYD
PPDGFVFEINDVSPPIQDDVLMFDYNVQERVNDFVAAALAQANVTRTNHIMWNMGTDFRY
QYAYSWFRQMDKFIHYVNQDGRVNALYSTPSIYTDAKYATNEQWPLKTDDFFPYADKPNA
YWTGYFTSRPALKGYVRSMSGYYQAARQLEFFRGRSDSGPNTDALADALAIAQHHDAVSG
TERQHVAADYAMRLSIGYLQAEKVVASSLAYLSKSESRSGQEQTVTNFQQCPLLNISYCP
PSEAVLSNGKNLVVVVYNPLGWKREEVIRIPISNEKVTVQDSSGTEIEAQLLPLSNASLR
LRSYYVRAYLGKTPGEPPKYWLAFSVTVPPIGFSSYIVSIAKQTDKGSGSTVSKVYSSER
SMNKTIEVGKGSLKLHYSADEGKLARYVNSRSQVTSSAEQSYSYYSGNDGTDKDPQASGA
YVFRPNSTVPIKSERKVPLIVMRGPVLDEVHQQLNPWVSQITRVYKQKDHAEIEFTIGPI
PADDGIGKEITTQITTAVKTNKTFYTDSNGRDFIKRIRDFRTDWDLQVNQPIAGNYYPIN
LGIYVQDGSTEVSVLVDRAVGGTSLVDGQIELMLHRRLLHDDTRGVGEVLNETVCIPEKC
EGLTIQGKFYVRIDNLGEGAKWRRTLGQEINSPLLLAFTEQDENDWVNSHALTFSGIDPS
YALPNNTAVITLQELENREVLLRLAHLYEIGEDKDYSVLANVELKKLFPTKKISKVTEMS
LSANQERSEMEKRRLVWKVEGSDQEFKVVRGGPVDPAKLVVELAPMEIRTFIVDFDHLRM
YGS
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaccgctgcggcgttgtttctgttcacggcggtgacggcggtcttattggct
gggttaccgggagcaaaatcggagtacatagcttataacacgacggcgggaattgtcccc
ggaaaaatcaatgttcatttagttccccactctcacgacgacgtcgggtggcttaagacc
gttgaccagtacttcgtaggcgccaacaactcaattcgcggcgcttgcgttcagaacgtc
ctcgactctgtaatttcggctttgctggaggagaagaatcggaagttcatctatgtcgag
attgcattctttcagagatggtggagacagcaaagcccggccttgaaggctaaagtcaag
gagctggtcagctctggtcagctcgagttcataaatggaggaatgtgtatgcacgacgag
gccaccccgcattacatggacttgattgatcagacaactttaggccatcaatttattctg
aaagaatttggtcaggttcctcgaatcggctggcagattgacccttttggccactctgct
gttcaagcttacctgcttggtgctgagttaggattcgattccctctttttcgctcgaata
gattaccaagatagagctaagcgactccgggataagactcttgaatttatatggcagggt
tctagatcccttgcttcatcttcgcagattttcacaggcattttccccagacattatgat
ccccctgatggtttcgtgttcgaaataaatgatgtgtcaccccctattcaggatgacgtt
ctcatgttcgactacaatgttcaagagcgagtcaatgactttgtagcagctgctttagca
caggctaatgtgacaagaacaaaccatattatgtggaacatggggacagatttccgctat
caatatgcatattcatggttcagacagatggacaaattcattcattatgtcaatcaggat
gggcgtgtcaatgcattgtattcaaccccatcaatctacactgatgcaaaatatgcgaca
aatgaacaatggcctctaaaaactgatgatttcttcccgtatgcagataaacctaatgca
tattggactggttattttacaagtcgtccagcccttaaaggttatgtcagaagtatgagt
ggttactatcaggcagctaggcaattggaattctttcgaggcagaagtgattctggacca
aacactgatgcattagctgatgctttggctattgctcaacatcatgatgcagttagtggt
acagaaagacagcatgttgctgctgattatgcaatgcgactgtcaataggctatttacag
gctgaaaaggtggttgcttcctctcttgcttacctttccaagtcagaatcaagatccgga
caggagcaaactgtcacaaattttcaacagtgtcctctcctaaatattagttattgtcct
ccatcagaagctgtcttgtctaatggaaaaaacttggttgttgttgtctacaatccactt
ggttggaagagagaagaagtgatacgtatccccatttccaatgaaaaggttactgttcag
gattccagtggaacagaaattgaagctcagcttctacccctatcaaacgcttctttgagg
ttaaggagttactatgttagagcatatttgggtaaaactccaggtgaaccacccaagtat
tggctagcattttcagtgacagtaccaccaattggtttcagttcttacattgtctcaatt
gcaaaacagacagataaaggtagtggttcaactgtttccaaagtatactcgtcagagaga
agtatgaataagaccatagaagttgggaaaggaagtttaaagctgcattattctgcagat
gaaggaaaacttgctcgttatgttaatagcagaagtcaggttacatcatctgctgaacaa
tcatatagttattatagtggaaatgacgggactgacaaagatcctcaggcgtctggggca
tatgtgtttcgaccaaatagcacagttcctataaagtctgaacggaaggttcctctaatt
gtcatgcgtggtccagttctagacgaagtacatcaacagctcaatccatgggtatctcag
attacaagggtgtacaagcaaaaggatcatgctgaaattgagttcactatcgggcctata
cctgcggatgatgggattgggaaggaaatcacaactcaaattacaacagccgtgaagacc
aataagacattctacacagattctaatggccgggacttcattaaacggattcgagatttc
aggacagattgggacctacaagtgaaccaaccaatagctggaaactattaccctattaat
cttggaatttatgttcaagatggcagtacagaagtttcagtcttggttgatcgtgcagtg
ggaggaactagcttggtagatggtcaaatagagctgatgctccacaggaggttgcttcat
gatgatacccgaggtgttggtgaggtactgaatgaaacagtttgcatccctgagaagtgt
gaaggtttaactatccaagggaagttttacgtgaggatcgataatcttggagaaggtgct
aagtggcgtcgcacgcttgggcaagagataaattctccgcttcttttggccttcacagaa
caggatgaaaatgattgggtgaattctcatgcattgactttctctggaattgatccttcc
tatgctttaccaaacaatactgctgtcataacactccaggaacttgaaaatcgggaagta
ctcctccggctggcccacctatatgagattggagaagacaaagactattctgtactggcg
aatgtggaactaaagaagttgttcccaacaaagaagatcagcaaagtgacagagatgagt
ttgtcggccaatcaagaaagatctgagatggagaagaggaggttagtatggaaagtagaa
ggttccgaccaagagttcaaggtggtgaggggtggacctgtcgaccctgcaaaactggta
gtggaactagctccaatggaaatacgcactttcattgtcgactttgatcacctccgtatg
tatggttcgtga
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integrated database retrieval system
