Malus sylvestris (European crab apple): 126634600
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Entry
126634600 CDS
T09027
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04142
Lysosome biogenesis
msyl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
126634600
04148 Efferocytosis
126634600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126634600
Membrane trafficking [BR:
msyl04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
126634600
Hops complex
126634600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_C
VPS18_solenoid_2nd
Clathrin
TPR_Vps41
zf-C3H2C3
Beta-prop_WDR36-Utp21_1st
zf_RING_Vps8_fungal
DUF8145
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-RING_5
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
126634600
NCBI-ProteinID:
XP_050161087
LinkDB
All DBs
Position
9:complement(9302122..9306626)
Genome browser
AA seq
953 aa
AA seq
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MYQWRKFEFFEEKLAGKCAIPEEVEGKIECCSSGRGKVVIGCDDGTVSFLDRGLNFSYGF
QAHSSSALFLQQLKQRNYLVTIGEDEQITPQQSAMCLKVFDLDRMQSEGTSSSTTSPDCI
GILRIFTNQFPEAKITSFLVLEEAPPILLIAIGLDNGSIYCIKGDIARERITRFKLQVEI
HSDKSQSSITGLGFRVDGQALQLFAVTPSSVSLFILQNQPSNTRRQTLDQIGSNMNSVAM
SDRLELIIGRPEAVYFYEVDGRGPCWAFEGEKKFLGWFRGYLLCVIADQRNNSNTFNIYD
LKNRLIAHSLAVKEVSHMLCEWGNIILIMADKSALCIGEKDMESKLDMLFKKNLYTVAIN
LVQSQQADAAATAEVLRKYGDHLYSKQDYDEAMAQYIHTIGHLEPSYVIQKFLDAQRIYN
LTNYLEKLHEKGLASKDHTTLLLNCYTKLKDVDKLNVFIKSEDGVGEHKFDVETAIRVCR
ATNYHEHAMYVAKKAGKHEWYLKILLEDLGRYEEALQYISSLEPSQAGVTVKEYGKILIE
HKPVETIEILMRLCTEDGESSKRGAANGSYLTMLPSPVDFLNIFTHHLPWLMDFLEKYTD
KVKDSPAQVEIHNTLLELYLSTDLSFPSISQASNGEDLNLRARSGAAATSRSQSNGKLIA
DTKDSNKEKDRFEKQQKGLRLLKSAWPSDLEFPLYDVDLAVILCEMNAFKEGLLYLYEKL
KLYKEVIACYMQAHDHEGLIDCCKRLGDSGKGGDPTLWADLLKYFGELGEDCSKEVKEVL
TYIERDDILPPIIVLQTLSRNPCLTLSVIKDYIARKLEQESKLIEEDRRAIEKYQETTSA
MRNEIQDLRTNARIFQLSKCTACTFTLDLPAVHFMCIHSFHQRCLGDNEKECPVCAPEYK
SVLETKRSLEQNSKDQDRFFQQVKSSKDGFSVIAEYFGKGVISKTTNGPTGAS
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgtaccagtggaggaaattcgagttcttcgaggagaaattggcgggaaagtgcgcgatt
cccgaggaggtggaagggaagatcgagtgttgctcgagcggcagagggaaggtggtgatc
ggctgcgacgacggcaccgtcagcttcctggaccgcggcctcaacttcagctacggattc
caagctcactcctcctccgcgctcttccttcagcagctcaagcaacgcaactatttggtg
acaattggagaagatgaacaaattactccgcagcaatcggcaatgtgcctcaaggttttc
gacctggatagaatgcagtccgagggcacgagctcaagcacaacgagccctgattgcatt
ggaatattgcggatattcaccaaccaatttcctgaagcaaagattacatcatttttagta
ctagaggaggcacctccgatactgcttatagctattggcttggataatggttcgatttac
tgcattaaaggggatattgctcgagaacgaatcacccggtttaagcttcaggtggaaatc
cattctgacaagagccagtcctcaattacgggactggggttcagagtggacggtcaagct
cttcagttgtttgctgtaactccttcctctgtgagcttgttcatcttgcagaatcaaccc
tcaaacacaaggcggcaaaccctagatcagattggaagtaatatgaacagtgttgcaatg
agtgatcgcttggagttgataattggtcgacctgaggccgtgtatttttatgaagttgat
gggcgtggaccatgttgggcttttgaaggagaaaagaaatttttagggtggtttcgtgga
taccttctttgtgttattgcagatcaaagaaataacagcaacactttcaacatttatgac
ttgaagaaccgtttaatcgctcacagcctagcggtcaaagaggtttctcacatgctttgt
gaatggggtaacataatacttatcatggctgacaaatcagctttgtgcattggggagaag
gatatggagagcaagttagatatgctctttaagaagaatctttatactgttgccatcaac
cttgttcaaagtcagcaagcggatgctgccgcaactgcagaagtgctgagaaagtatggg
gatcatctatatagcaagcaagattatgatgaggcaatggcacagtatatccataccatt
ggtcacctcgagccttcttatgtgatacagaagtttctagatgcacaacgaatctacaac
cttacaaattacttggaaaaattgcatgagaaggggcttgcttccaaagatcataccact
cttctactgaattgctataccaaattgaaagatgttgacaaactaaatgtgttcattaaa
agtgaggatggtgttggggaacataaatttgatgtggagactgcaataagagtctgccgt
gccaccaactaccatgagcatgcaatgtatgttgctaaaaaggctgggaagcacgaatgg
tacttaaagatcttacttgaagatcttggccgatatgaggaagctttgcaatatatttca
agccttgaaccaagccaagctggagtgacagtgaaagagtatggtaagattcttatagag
cacaagcctgtggaaacaattgagatactcatgaggctgtgcactgaggatggtgaatca
tccaagagaggagccgctaatggttcatacctgacaatgttgccatctccggttgatttt
ctcaacatcttcacccatcatcttccctggcttatggattttcttgaaaaatataccgac
aaggtcaaggactctcctgcacaagtagaaatccataacacgctcttggagttgtacttg
tccactgacttgagcttcccatcaatatcacaagctagcaatggtgaagatcttaatctc
agggctagatcaggtgcagctgcaacatcaagaagccagtccaatgggaaattgattgct
gataccaaagattcaaacaaggaaaaggaccgttttgaaaagcaacagaaagggctacga
cttcttaagagtgcatggccatctgacctggaatttccactttatgatgttgaccttgcc
gtaattctttgtgaaatgaatgcatttaaggaaggcctgttgtatctctatgaaaaattg
aaactgtataaagaggtgattgcttgctacatgcaagctcatgaccatgagggtttgatt
gattgctgcaaacgactaggggattcagggaagggtggggaccccactctttgggcagat
ctgctaaaatattttggtgaacttggagaagattgctccaaagaagtgaaggaagttttg
acatatatagaaagggatgacatattgcctcctattattgttcttcaaactttgtccaga
aatccatgtctcacactctctgtcattaaggattacattgccagaaagcttgaacaagaa
tcaaagctgatcgaagaggaccgtcgagcaattgaaaagtatcaggaaaccacatctgca
atgagaaacgaaattcaggatcttaggacaaatgccagaatctttcagctcagcaagtgc
actgcatgcactttcaccctcgatctcccagctgtgcattttatgtgtatccactcgttc
catcagcgttgcctcggggataatgagaaggagtgtcctgtatgtgctcctgaatacaaa
tctgttctcgaaacaaaaagaagtctagagcagaactccaaagatcaggatcggttcttc
cagcaagttaaaagttcaaaggatggtttttctgtgatcgccgagtattttgggaagggg
gtgatcagcaaaaccactaatggacccacaggtgcttcttga
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