Malus sylvestris (European crab apple): 126634665
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Entry
126634665 CDS
T09027
Name
(RefSeq) protein argonaute 16
KO
K11593
eukaryotic translation initiation factor 2C
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126634665
03036 Chromosome and associated proteins [BR:
msyl03036
]
126634665
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
126634665
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
126634665
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
126634665
microRNA pathway
RISC loading complex
126634665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
126634665
NCBI-ProteinID:
XP_050161161
LinkDB
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Position
9:8644157..8651454
Genome browser
AA seq
899 aa
AA seq
DB search
MEDVASAGIADGEPQPAPPSPTIPPKLKPEVMTPSKYSIMSRRGTGTTGKEINLLANHFK
VSVNVPDAVFYQYSVSITSEDKKVVEGKGIGRKLIDRLYQTYSSELGGKKFAYDGEKALY
TVGPLPQNKLEFTVVLEETFAKHENGSTNGTEKRSRRSFRSRTFNLEISYAAKIPLKPIS
LVLEGADVENTQDSLRVLDIILRQQAANRGCLLVRQSFFHDDSRNFTDVGGGVKGVRGFH
SSFRPTQGGLSLNMDVSTTMILTPGPVIDFLLANQDVREPRYIDWVKAKRMLKNMRINAR
HRNMEFKIIGLSEKPCNQQYFPMKLKIGDNGTSEDQTVEITVYEYFTKHCGVEITSSQYM
PCLDVGKPKRPNYLPLELCSLVSLQRYTKALSSKQRASLVEKSRQKPQERIRTVTDAMKK
YQYDDDPVLATCGISINKELTQVKGRVLETPKLKVGNSDDCIPRNGRWNFNNKTLLNPTR
IDRWIVVNFSARCDTSHLSRELINCGRKKGIIIERPFTLIEEDPQCRRLTPVARVDKMFE
QILAKLPGEPQFILCVLPEKKNSDIYGPWKKQSLTEFGIATQCISPTKISDQYLTNVLLK
INTKLGGINSLLAIEHSSRVPLVKDTPTMILGMDVSHGSPGRSDIPSVAAVVSSRSWPLI
SRYRAAVRTQSPKMEMIDALYKPLENGTDAGIIRELLVDFYKTSNGRKPTQIIVFRDGVS
ESQFNQVLNIELDQIIKAYQHLGEVNVPKFTLIIAQKNHHTKLFQQGSPDNVPAGTVVDT
EIVHPRNYDFYMCAQAGMIGTSRPAHYHVLVDEIGFSPDDLQNLIHSLSYVYQRSTTAIS
IVAPICYAHLAAAQVGQFMKFEDLSETSSGKGSVTSSESVPVPELPKLHENVQGSMFFC
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgtagctagtgctggaattgcagacggggaaccacaaccggccccaccctct
ccaaccataccacctaaattgaagccagaagtaatgactccttcaaaatattctatcatg
agtaggcgtggaactggaactactgggaaagagataaatttgctcgcaaatcacttcaaa
gtttctgtgaatgttccagatgctgtattttaccagtattctgtttctattacttcagaa
gataagaaagttgttgaaggcaagggaatcgggagaaaacttattgacaggctttatcaa
acatactcttcagaacttggtggtaaaaagtttgcatacgatggggagaaagcactgtac
acagtgggtcctctgccacagaacaagcttgagttcacggttgttctggaggaaacgttt
gcaaagcatgaaaatgggagcaccaatgggaccgaaaaacggtcaagacgttcttttcgg
tcaagaactttcaacttagagataagttatgctgccaaaatacctctgaaaccaatttct
cttgtcctcgagggagctgatgtagaaaatacgcaagattcactgagagtgcttgatatt
attctgcggcagcaagcagctaacaggggttgccttctagtacgacagtcattcttccat
gatgactctagaaactttactgatgttggaggaggtgtaaaaggtgttcggggatttcat
tctagttttcgtccaactcagggtggcttatccttgaatatggatgtatctacaacaatg
atcctaacacctggacctgtgattgattttctgttagctaaccaggatgtaagagaacct
cgctacatagactgggtaaaggccaagagaatgctgaaaaatatgaggattaatgcaaga
caccgtaacatggaattcaaaataataggcttaagtgagaagccatgtaatcagcaatat
tttcctatgaagttaaaaattggtgacaatggcacgagtgaggatcagactgtggagatt
actgtttatgagtatttcactaaacactgtggtgtagaaatcacctcttctcagtacatg
ccatgccttgatgttggcaagcccaagaggcctaactatctgcctctggagctttgttca
ctagtttcgcttcagcggtatacaaaagcattatcttcaaagcagagggcatccttagtt
gaaaaatcaaggcagaagcctcaggaaagaataagaactgtgactgatgctatgaaaaaa
taccagtatgatgatgatcctgtgcttgctacatgtggtatttctataaataaggaattg
actcaggtcaagggccgtgttcttgagactccgaagttaaaggttggtaacagtgatgat
tgcatcccccgtaatggacgatggaactttaacaacaagacactgctaaaccctactcgc
attgaccgttggattgttgtcaacttctctgcacgctgtgataccagtcacctctcacga
gagcttatcaactgtgggaggaagaagggcattattattgagcgcccctttacattaatt
gaggaagatccacaatgcagaagactgacccctgttgcaagagttgacaagatgtttgaa
cagattctagctaagcttccaggcgaacctcaattcattctctgtgtcttaccagagaaa
aaaaatagtgatatttatgggccttggaagaaacaaagtcttactgagtttgggattgcc
acacaatgcatttcccctactaagatcagtgatcagtaccttaccaatgtacttcttaag
ataaatactaagcttggaggaataaattctttgttggcaatagagcactcctcacgtgtt
cctctggtgaaggatactcctacaatgattttggggatggatgtctctcatgggtctcct
ggtcgatcagatattccttctgttgctgcagttgttagctctcgaagttggccacttatt
tcaaggtatagagcagctgttagaacacaatctcctaagatggagatgattgatgctcta
tacaaaccactggaaaatggaactgatgctggtattatcagggaactgcttgtggacttc
tataagacgagcaatggacgcaaaccaactcagattattgtcttcagggatggagtgagc
gagtcacaattcaatcaagtcttgaatatcgagctagaccaaatcataaaggcttaccag
cacctcggggaggttaacgttccaaagtttactttgattattgcacagaagaatcatcac
acaaagctatttcaacagggttccccagataatgttccagcagggacagttgtggacaca
gagattgtgcatccaaggaattacgatttctacatgtgtgctcaagcaggaatgatagga
acttcgaggccagcgcactatcatgtcttggttgatgagattggattttctcccgatgac
ttgcaaaacctcattcactccctttcttatgtgtaccagaggagtacaactgcaatctct
atcgtggcgcccatttgttatgcccaccttgctgcagcacaagtggggcagtttatgaag
tttgaggatctgtcagaaacgtcatcagggaaaggcagtgtcacttcatcagaaagcgtc
ccggttccagagctccctaagttgcatgagaacgtccagggctcaatgttcttctgctga
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