Malassezia sympodialis: MSY001_0017
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Entry
MSY001_0017 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
msym
Malassezia sympodialis
Pathway
msym03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MSY001_0017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msym03000
]
MSY001_0017
03021 Transcription machinery [BR:
msym03021
]
MSY001_0017
Transcription factors [BR:
msym03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
MSY001_0017
Transcription machinery [BR:
msym03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
MSY001_0017
RNA polymerase III system
TFIIIB
MSY001_0017
RNA polymerase I system
SL1/TIF-1B
MSY001_0017
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF4295
Motif
Other DBs
NCBI-GeneID:
30054902
NCBI-ProteinID:
XP_018738668
UniProt:
M5E4L8
LinkDB
All DBs
Position
Unknown
AA seq
247 aa
AA seq
DB search
MSTSGSLQLPQAQPKSTPVGLPQQKPLSLPTQSGKANDTSGDDDVKSAVKDTPSVPAPIT
EQALSSMHGIVPTLQNIVATVNLEARLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTA
LIFASGKMVITGAKSEDDSRLASRKYARIIQKLGFEARFSEFKIQNIVGSCDVRFPIRLE
GLAYSHGVYSSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLTGAKVREEIYTAFNLILPV
LSEFRKP
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgtctactagtggctcactacaactccctcaagcccaacccaaatccactccagttgga
cttcctcaacagaagccactgtcgctccctacccagtcgggcaaggctaacgatacgagt
ggtgacgatgatgtgaagtctgccgtcaaagataccccgtcggttccagctccaattacg
gagcaagctctatcaagcatgcatggaattgtgccgacactacaaaatattgttgctaca
gttaacttggaagcaaggctggaccttaagactattgcattgcacgcccgcaatgcggag
tacaaccctaagcgtttcgcagcagtgattatgcgtatccgtgaacccaagacgaccgct
cttatatttgcatcgggcaagatggttatcacgggtgctaagagcgaagacgacagtcgt
ctcgccagtcgaaagtacgcgcgtattatccaaaagcttggattcgaggctcgcttcagt
gaattcaagattcagaatattgtcggatcttgcgatgtgcgcttccccatccgcctggag
ggtctggcgtacagtcacggtgtttattcatcgtacgagccagagctcttccctggcctg
atttaccgtatggtcaaaccaaaggtcgtgcttcttatattcgtctcaggaaaaatcgtc
ttaacaggcgcgaaagtacgcgaggagatttataccgccttcaaccttattctccctgtg
ctgtctgaattccgaaaaccttga
DBGET
integrated database retrieval system