KEGG   Malassezia sympodialis: MSY001_0110
Entry
MSY001_0110       CDS       T06541                                 
Name
(RefSeq) uncharacterized protein
  KO
K10610  DNA damage-binding protein 1
Organism
msym  Malassezia sympodialis
Pathway
msym03420  Nucleotide excision repair
msym04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:msym00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    MSY001_0110
  09124 Replication and repair
   03420 Nucleotide excision repair
    MSY001_0110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:msym04121]
    MSY001_0110
   03400 DNA repair and recombination proteins [BR:msym03400]
    MSY001_0110
Ubiquitin system [BR:msym04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     MSY001_0110
DNA repair and recombination proteins [BR:msym03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      MSY001_0110
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      MSY001_0110
SSDB
Motif
Pfam: CPSF_A Beta-prop_RSE1_2nd Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 30054995
NCBI-ProteinID: XP_018738755
LinkDB
Position
Unknown
AA seq 1156 aa
MAACFLALARYDRAAEAQALRLRGDVYAARDWLARPAHAKYLDDADFLAEKARIDTQIRT
RERSSATQWRGFLTYTAAVAGVAVHAWWHGYTYLCLAHHASLSFYTLDDEAPTPTGCEAA
PVRVRQVRLHARVLAMEAVRRARGPDALLVLTDHPTPRLVRIEPRGTWDVHTVQVWDLHL
AGRTAAELGLGLAVELEGADGAPGRWVLAHVYTGQVRLLSLDTKQNWDARVVLARKPSTP
AMLALLTVSTAAASQGQPVLTFHTIHAARHALRPVPWSDAEPSSSVPIPDADAFGAHYLV
ALPADAGGGVLLFCEHSVFFVPPPTIAARGVGTKPAPKRARPSPPALQHTSLAQGGQVVA
ACVLPTSMYPVLYAMADGSLFVMQGPWAPSAGAARFDVRCLARGLSVPAGPHALTPLSDQ
IVVLASATSDSHLGLVDRGWHSIHTWPHAGPVLDLAIAAPAAGPAAPPRLLRACGAPPAY
CLQLLSHALPTMLHAEGAAPECIDLYACHTPSPSGLHTTALVAVYTHEAHVYDASLVLRS
AVAGRVVYAAGVGGHPLLVTRTHIEWQDKTWAPEAEVVAAYAAGDHVLIGLHGGRVVLLR
ASASTGLTVVSEQVLRAEVACVWLGDDVLVGLWDASVIRLAVPTLHTKQTWTQVAPSVPS
CVLLHAWVPESPPGLVLGTVDGRVLVLDGETVAHSLQLRGSRVRCEPCALDVLGLRGTGL
LLGTRTDAGLLYAVGGQWQYSPWPAHGVDALVRVYLPRSPALHCAVLAHARLTLHSVTGV
QQDHVTTAPLGAEAPTSVSLASEHAVVALWDEDATRGRVALCDRRSLEHRAEMVLPVPER
PSCVHVARINETEHVFLGTGYVTTAGTAPTSGRVIVGRLDGTHIEMLGALDVPGHVLGVA
YVPHYIVAAVDAQVHTYAWDADARCLHPVARWGCAFMASCIAAHESTIVVGDAMHSLTVL
HIEADGTLRELARDLDPYWTTAVGIYDVAGQEYVGADIAMNMFVAQRLALPESAPREAWS
HVMRRTTAFHYGDMVNRLVRASEGCVYVGAAAGGVGMLTDLAPHDAQVLGYLQEALASET
CSVDGVPWAVWRTLRTDTREAPPLGVIDGEFVRGFLTCDEAQRASILTAAQRLAHDAACR
EALHETALRSLLSRLP
NT seq 3471 nt   +upstreamnt  +downstreamnt
atggccgcatgcttccttgcacttgcgcgctacgaccgtgcggctgaggcgcaagcactt
cgcctgcgcggcgatgtatacgcggcgcgcgactggctcgcgcgccccgcacatgccaag
tatctcgacgatgccgattttctcgctgaaaaggctcgaattgatacgcagattcgcaca
cgcgagcgttcaagtgctacgcagtggcgcggcttcctaacatacacggcggcggtcgca
ggggtcgctgtgcatgcgtggtggcatgggtatacgtatctgtgcctagcacatcatgca
agcctatcgttctacacactcgacgacgaggccccaacgccgacaggctgcgaagccgcg
cctgtgcgtgtgcgccaggtgcgtctacatgcgcgtgtgctggccatggaggcagtacgt
cgcgcgcgagggcccgatgcacttcttgtgctcactgaccacccgacgccgcgcctcgta
cgcattgagccacgcggaacgtgggacgtgcacacagtgcaggtttgggacctgcacctg
gcaggacggaccgccgccgaattgggccttggcctcgcagtagagctggagggcgcagat
ggtgcaccgggtcgctgggtgctcgctcatgtgtatacagggcaagtgcgcctcttgtcg
ctcgatacgaagcagaactgggacgcacgtgtcgtcctggcccgtaaaccatcgacacca
gccatgttggctcttctcacagtatcgactgctgcagcatcgcagggacagcccgtgctt
accttccacactatccatgcagcgcgccacgctctgcgccctgtgccgtggagcgacgct
gagccttcttcctctgtgccgatcccggacgctgacgccttcggagctcactatctcgtt
gcgctgcctgcggatgcaggcggtggtgtccttctgttttgtgagcacagtgtattcttt
gttccgccacccacgatcgctgcgcgcggcgtcgggacaaagcccgctcccaaacgcgca
cgtccgtcgccgcccgccttgcagcatacaagtctcgcccagggtggacaggtcgttgcg
gcctgtgtgcttcccacttccatgtatcccgttctctatgctatggcggacggcagcctc
tttgtgatgcaaggcccatgggccccttcagcgggcgctgcgcgcttcgatgtacggtgc
ctggctcgtggactgtctgtgcctgcaggtccacatgctctgacgccgctaagcgaccag
attgtggttcttgcgagcgctacgagcgactcgcacctgggactcgtggaccgtggatgg
cactccattcatacgtggccacatgcagggcccgttctggatttggctattgcagcaccc
gctgcaggccctgctgcgccgccgcgcctactgcgagcttgtggtgcgcctcctgcttac
tgccttcagctactctctcacgcgctaccgactatgcttcacgcagaaggcgcagcgccc
gaatgcattgatctctatgcatgccataccccgagtccctcagggcttcacacgacggcg
cttgtggccgtgtacacacacgaggcacatgtgtacgatgcatcactggtgctccgcagc
gccgtggccggccgtgtcgtgtacgcggccggcgtcggtggacatcctctgcttgtgacg
cgcacgcacattgagtggcaggacaagacatgggcgccagaggctgaggtggtggccgct
tacgcggctggcgaccatgtccttatcggcctacatggcgggcgtgtggtgctgctacgt
gcgagcgcctctaccgggttgacggtcgtgagcgagcaggttcttcgggccgaagtggcg
tgcgtttggctaggcgacgatgtactcgtcggcctctgggatgcgtcggtgattcgtctg
gcagtgcctacgctccatactaagcaaacatggacacaggtcgctcccagtgtgccatcg
tgtgtgcttcttcatgcatgggtgccggaatctccccccgggctcgtgctaggtacagtc
gatggccgtgtgctcgtgctggatggagaaacagtggcccattccctgcagctgcgtggg
tcgcgtgtgcgttgcgaaccatgcgcgcttgatgtgcttggcctgcgtggtacgggtctc
ctgcttggcactcgcaccgatgcgggcctactctatgcagtaggcggccagtggcagtac
agtccatggcctgcgcacggcgttgatgcactcgtgcgtgtgtaccttcccaggagccct
gcgctacactgcgcagtgctagcacatgcacgactcacgttgcacagcgtcacgggcgtg
cagcaggaccatgtgactacagcgccgctcggcgccgaggcacccacgagtgtgagtctt
gcgtcggagcacgctgtcgtcgcattatgggatgaggatgcgacccgtggccgtgttgcc
ctgtgcgaccgcaggtcgctcgaacatcgtgccgagatggtgctgcccgtgccggagcga
ccaagctgcgtgcacgtcgcgcgcatcaatgagaccgaacatgtattcctcggcacgggc
tatgtgacgaccgcaggcactgcgcccacatcggggcgcgtgattgtcgggcgtttagac
ggcacgcacatcgagatgctaggcgcgctggacgtgccaggtcatgttctaggtgtggcg
tacgtgccccactatattgtcgcagctgtggatgcacaagtgcacacatacgcatgggac
gcagacgcccggtgcttgcatccagtcgcgcgctggggctgcgcgttcatggcgagctgc
atcgcggcacacgagtcgacgattgtggtgggtgacgcgatgcactcgctcacggtgctg
cacatcgaggcagacggtacgttgcgcgagctggcgcgcgacttggacccgtactggaca
acagcggtcggtatctacgatgtggccggccaagagtatgtcggcgcggacattgcgatg
aatatgtttgtcgcgcagcgcttggcactgcccgagtctgcgccgcgcgaggcttggtcc
cacgtgatgcgacgcacgacggcgtttcactatggcgacatggtcaatcggctcgtgcgt
gcgagcgagggctgtgtgtatgtcggcgctgcggcggggggtgtgggtatgttgactgac
ttggcgcctcacgacgcgcaggtgcttggctacctgcaagaggcactcgcgagcgagact
tgcagtgtggacggcgtaccgtgggcggtctggcgcacgctgcgtaccgatacgcgcgag
gcaccaccgctcggcgtgattgatggcgagtttgtgcgtggcttccttacatgtgatgag
gcgcagcgtgctagtatcctgacggccgcgcagcgtctcgcgcacgacgcggcctgccgc
gaagcgctccacgagacggcgctcaggtcgctgctgagccgccttccgtag

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