Malassezia sympodialis: MSY001_0232
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Entry
MSY001_0232 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
msym
Malassezia sympodialis
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msym03019
]
MSY001_0232
03041 Spliceosome [BR:
msym03041
]
MSY001_0232
03036 Chromosome and associated proteins [BR:
msym03036
]
MSY001_0232
Enzymes [BR:
msym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MSY001_0232
Messenger RNA biogenesis [BR:
msym03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
MSY001_0232
mRNA cycle factors
Common to processing body (P body) and stress granule
MSY001_0232
Spliceosome [BR:
msym03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
MSY001_0232
Chromosome and associated proteins [BR:
msym03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
MSY001_0232
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
ResIII
GxGYxYP_N_3rd
Motif
Other DBs
NCBI-GeneID:
30055117
NCBI-ProteinID:
XP_018738875
UniProt:
M5E5B5
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MSNDSQGNGAGTTGLESSLSNMNVNAPASSPAPNDNPGAAATATAGPKKRYVPPHLRNQP
EGVAPPRSGGRGASTLPPAFSSGRRGYGPSEPAATGGRWSGLSSGGGWSDRGSRRNDGFG
SWKDGKHIIGPSNERLERELFGVADDGLHQSTGINFDKYGDIPVEATGRDVPEPIIEFTH
PPVDEHLISNIRLARYTTPTPVQKYSIPIVGAGRDLMGCAQTGSGKTGGFLFPILSALFT
HGPPPMPPQPPSYGRSKAYPSVLILAPTRELVSQIHEEARKFTYRSWVRPAVVYGGAEMG
AQLRQIERGCDLLSATPGRLVDLIERGRISLANVRFLVLDEADRMLDMGFEPQIRRIVVG
EDMPGVMDRQTLMFSATFPQNIQMLAKDFLKEYVFLSVGRVGSTSENITQKIEFVEDRDK
QSVLLDVLAAMPKTGLTLIFVETKRMADMLSDFLIYSNIPATSIHGDRTQREREYALDLF
RSGRTPILVATAVAARGLDIPNVTHVVNYDLPSDIDDYVHRIGRTGRAGNVGHATAFFNR
NNRNIVRDLIKLLQEANQEVPSWLEMVASESAFSSGSRGGRGGRIGGGRMGGRGSGFGGR
DLRSGMGGGSAFGPRSGGYGGGYGGGSFYNGPPAPDHGSSAGGQSWWQ
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacgattcacagggtaatggcgcaggcaccaccgggctggagtcttcgctttct
aacatgaacgtaaatgcccccgcttcctcgcctgctcctaatgacaaccctggtgcggct
gcaaccgcgacggccggacccaagaagcgctatgtgccacctcatcttcgcaaccagccg
gagggtgtggcgcctccgcgatctggaggacgtggcgcctcgacgctgcctcctgccttt
agcagcggccgtcgcggatacggtcctagcgagcctgctgcgacaggtggtcgctggagc
ggtctgagcagtggcggtggctggagtgaccgcggatctcgtcgcaatgacggttttggt
tcgtggaaggacggaaagcacattattggtccgtcgaatgagcgcctagagcgtgaactc
tttggtgtggcagacgacggcctgcaccaaagcacgggtatcaactttgacaagtacggc
gatattcctgttgaggcgactggtcgtgatgtgcccgaaccgatcatcgagttcactcat
cctccggtggatgaacacctgatttcgaacatccgtctggcacgatacacaacgccaact
ccggtgcagaagtactcgattccgatcgttggtgctggtcgcgacctgatggggtgtgcc
cagaccggttcgggtaagactggtggctttctgtttcccatcctttcggcactgttcacc
catggcccgccaccgatgcccccacagcccccatcgtacggtcgctcgaaggcctacccc
tctgtgttgatcctcgcacctacacgtgagcttgtgtcgcagattcacgaggaggcgcgc
aagttcacctaccgttcgtgggtgcgccccgccgtcgtatacggtggcgctgagatgggc
gcacagctgcgccaaatcgagcgtggctgtgacctgctgtcggcgactcccggtcgtcta
gtggacttgattgagcgcggtcgtatcagtcttgctaatgtgcgtttcctggtgctcgat
gaggccgaccgtatgcttgatatgggtttcgagccccaaatccgacgcatcgttgtgggc
gaagatatgcccggtgtcatggaccgtcagacgcttatgttctcggctaccttcccccaa
aatatccagatgctcgccaaggactttttgaaggagtacgtgtttttgtcggtgggtcgt
gtcggttccacctcggagaacattactcaaaagattgagtttgtcgaggaccgcgacaag
cagtcggttctgctcgacgttcttgctgccatgcctaagacaggacttacactgattttc
gttgaaaccaagcgcatggctgacatgctgtcggactttttgatctactcaaatatccct
gccacctccattcacggtgatcgcacgcagcgtgagcgtgagtatgcactggacctcttc
cgctcaggtcgcacgccgattctggtggctaccgctgtggctgcgcgtggtcttgatatc
cccaatgtgacgcatgtggtgaactacgacttgccgtccgacattgacgactatgttcat
cgtattggtcgtaccggtcgtgctggtaacgtcggtcatgccaccgccttctttaatcgc
aacaaccgcaacattgtccgcgatcttatcaagctactacaggaggccaaccaggaagtg
ccctcgtggctcgagatggtagcttctgagagcgccttttctagtggtagccgcggcggt
cgcggcggtcgtatcggcggcggtcgcatgggcggtcgcggcagtggctttggtggtcgc
gacttgcggtccggcatgggtggcggtagcgccttcggccctcgcagtggtggctacggc
ggcggctacggcggtggcagcttctacaacggcccccctgcccccgaccacggtagcagc
gccggcggccagtcgtggtggcagtaa
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