KEGG   Malassezia sympodialis: MSY001_0247
Entry
MSY001_0247       CDS       T06541                                 
Name
(RefSeq) uncharacterized protein
  KO
K14298  mRNA export factor
Organism
msym  Malassezia sympodialis
Pathway
msym03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:msym00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    MSY001_0247
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msym03019]
    MSY001_0247
   03036 Chromosome and associated proteins [BR:msym03036]
    MSY001_0247
Messenger RNA biogenesis [BR:msym03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     MSY001_0247
Chromosome and associated proteins [BR:msym03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    MSY001_0247
SSDB
Motif
Pfam: WD40 WDR55 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz WD40_MABP1-WDR62_2nd EIF3I Beta-prop_TEP1_2nd ANAPC4_WD40 NBCH_WD40 Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_DCAF12 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_HPS5 Beta-prop_WDR19_2nd Beta-prop_EIPR1 Beta-prop_SCAP Ge1_WD40 WDCP
Other DBs
NCBI-GeneID: 30055132
NCBI-ProteinID: XP_018738890
LinkDB
Position
Unknown
AA seq 430 aa
MRTPPAGGPPHPRTLIEVALKTEDERAERRLSFFQTNSTPGWGSRPAASATPTVTAATKV
AGEQDIEVTPGANDTVSALAFSPTADVLAVASWDTFVRIYRIDKSNAQPVQPWQQYQHEG
PVLDVCFNAEGTKVISVGADKVARCFDLNTNMCAVVAQHNDTIRCVRWIRAFGGALVTGS
WDKTVKLWKIEPQPTLITSIDLPERVYAMDVIGLIIIVAMAERKIMAFQCNEANGTAQQV
VDQFSPLKYQTRSLAALPDGDGFALGGTEGRVAVHYFHDPPDPKDGKVKKFAFRCHRRVN
ADHPDVPRNETQLFPVNAIVFNAQGTFATGGGDGSISFWCKASRTRLKSTYSETYAAFET
KGTAMAPKELFKTNPNRLPVTAIAFNADASIFAYALGYDWHKGYQGATNEAHVFIHPVNP
EDIKKRPPKA
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgcgcacgccgccagcgggcggcccaccacacccacgtaccttgatcgaagtagccttg
aagacggaggacgagcgagcggagcgccgcctgtcgttctttcagaccaacagtacgccc
gggtggggcagccggccagcggccagcgccacgcctactgtgacggcggccacgaaggtc
gccggtgagcaggacattgaggtgacgccgggcgctaacgacaccgtctccgccctcgcc
ttctccccgacggccgacgtgctggcggtggcgagctgggacacattcgtaaggatctac
cgtatcgacaagtcgaatgcacagcccgttcagccgtggcagcagtaccagcacgagggg
cccgtgctcgacgtatgcttcaacgccgagggcaccaaggtgatctcggtgggcgccgac
aaggtagcccgttgctttgatctgaataccaacatgtgtgctgtggttgcgcagcacaat
gacacgatccgctgcgtgcgctggatccgcgcgtttggcggtgccctggtgacgggcagc
tgggacaagactgtcaagctgtggaaaattgagccgcagccgacactcattacttcgatt
gacctgccagagcgcgtgtatgcgatggacgtaattgggctcatcatcattgtcgcgatg
gccgagcgcaagatcatggcgttccagtgcaacgaggccaacggcacggcgcagcaggtc
gtcgaccagtttagccccctcaagtaccagacacgctcacttgcggcgctacccgacggt
gacgggttcgccctcggcggcactgagggccgcgtcgctgtacactacttccacgaccca
ccagacccgaaggacggcaaggtgaaaaagtttgcgttccgctgccaccgccgcgtgaac
gcggaccaccctgacgtaccgcggaacgagacgcaactgttccccgtgaatgccatcgtg
tttaatgcacagggcacgtttgccaccggtggcggtgacgggtcgatcagcttctggtgc
aaggctagccgcacgcgtttgaaaagtacgtatagcgagacttacgcagctttcgagacc
aagggcacggcgatggcccccaaggagctcttcaagacgaatccgaaccgactgcccgtc
acggccattgccttcaacgccgacgcatcgatctttgcatatgcgctcggctacgactgg
cacaaaggatatcagggcgcaacgaacgaggcccatgtatttattcacccagtcaacccc
gaggacatcaagaagcggccacccaaggcctag

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