Malassezia sympodialis: MSY001_0256
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Entry
MSY001_0256 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
msym
Malassezia sympodialis
Pathway
msym03013
Nucleocytoplasmic transport
msym03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MSY001_0256
03015 mRNA surveillance pathway
MSY001_0256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msym03019
]
MSY001_0256
Enzymes [BR:
msym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MSY001_0256
Messenger RNA biogenesis [BR:
msym03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
MSY001_0256
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
30055141
NCBI-ProteinID:
XP_018738898
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MSDRNGAWGALTAVESLSERLGDILADVSRNSDWADDEASNAPAEASTGAPLHESRYDVQ
VTLADQQADPNSPLYSVKSFDDLGLHSDLLKGIYSMKYTKPSKIQERALPLLLQNPPRNM
IGQSQSGTGKTAAFVLTMLSRIDFSMEKPQAIALAPSRELARQIMDVVQAMGKFTPVKTA
FAIPDALKRGEKVHAHLVVGTPGKTFDLIKTRALDPSAVKVFVLDEADNMLDQQGLGEQS
IRVKNTMPKSCQLVLFSATFPEHVYAFATKFAPNANEIRLKQEELSVESIKQFYMDCKSE
EHKYEVLVELYNLLTIGQSIIFCAKRETADKIAQRMTAEGHRVDSLHGKLDTAARDRTID
EFRTGKCKVLIATNVIARGIDIQQVTLVINYDMPLTQRGEPDAETYLHRIGRTGRFGRKG
VSINFVHDATSRKHMETIEKALHCHIVGVQTDDLEAMEATIKEGASR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcgcaacggtgcgtggggtgcgctgaccgcagtggagtccttgtcggagcgc
cttggcgacattctggcggatgtgtcgcgcaactcggattgggcagatgatgaggcgtct
aatgcgcctgcggaggcctcgacgggggccccgctgcacgaatcgcgctacgatgtgcag
gtgacgctggcggaccagcaggcggacccgaactcgccactgtattcggtcaagtcgttt
gatgacctgggtctacacagcgacctgctcaaaggcatttattcgatgaagtacaccaag
ccgtccaagatccaggagcgagcgctcccgctgctgctgcagaacccgccgcgcaacatg
atcgggcagtcgcagtcaggtaccggcaagacggccgcctttgtgctgacgatgctctcg
cgcattgatttcagcatggaaaagccgcaggcgattgcgctggcgccgtcgcgcgagctc
gcgcgccagattatggatgtggtacaggccatgggcaagttcacgccggtcaagacggct
tttgccattcccgatgcactcaagcgtggggagaaggtgcacgcacacctcgtcgtgggc
acgccgggcaagacgttcgatctgatcaagacgcgcgcgctcgacccgagtgcggtcaag
gtgttcgtgctggacgaggccgacaatatgctcgaccagcagggcctgggcgagcagagt
atccgcgtgaagaacacgatgcccaagtcgtgccagcttgtgctgttctccgcgacgttc
cccgagcatgtgtatgcatttgcgaccaagtttgcgccgaacgccaacgagatccgactc
aagcaggaggagctcagcgtggagagcatcaagcagttctacatggactgcaagtcagag
gagcacaagtacgaggtgctcgtcgagctgtacaacctgctcacgattgggcagagcatt
atcttctgtgccaagcgtgagactgcagacaagatcgcccagcgcatgacggccgagggc
caccgagttgactcgctgcacggcaaactcgacacagccgcgcgtgaccgcacgattgac
gagttccgcacgggcaagtgcaaggtcctcatcgctacgaacgtcatcgcgcgcggcata
gatatccagcaggtcaccctcgtgattaactacgacatgccacttacacagcgcggcgag
ccggacgctgagacgtatctgcaccgcattggacgcaccggccgctttgggcgcaagggt
gtctcgatcaactttgtgcacgatgccacgtcgcggaagcacatggagaccatcgaaaag
gccttgcactgccacatcgtcggcgtacagacggacgatcttgaggctatggaggccacg
atcaaggagggtgcgtcgcgctag
DBGET
integrated database retrieval system
