Malassezia sympodialis: MSY001_0337
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Entry
MSY001_0337 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K12821
pre-mRNA-processing factor 40
Organism
msym
Malassezia sympodialis
Pathway
msym03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MSY001_0337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msym03041
]
MSY001_0337
Spliceosome [BR:
msym03041
]
Complex A
U1 snRNP components
U1 related factors
MSY001_0337
Complex B
MSY001_0337
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
30055222
NCBI-ProteinID:
XP_018738973
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MRQVEYKNAKGRPYWYHPGERRSVWDKPDELKTARERAMETTAWREYKSGERSYYVNKET
KASTWTMPADLKAFLDTIPDEPAPAVPGRAPASPASGAASPSTPHTPTFTQTAMAVADSA
GTGTAVVRPAPTQARTSTPMYATQEEAESAFVAMLRTKGIGAHATWEQVLRDIITEPRYK
ALRTLEERKATFKKYVEELQELEAAQREEKLAELRPFVLRALQQNGGLKPYASFATFKKK
LERHPVWRDFEDESQAHALFEAIRRDVREKDAARKKSVQQHNRSALSALLKTIEMTPMTL
WQDVHRTLVESEEFRRDARLQRMPPAEMLALFEEHMVSVERDAERALATREEPVRREREV
RDGFRALLQEHVDAGTLHARCTWASFYAQVRDDERLAAMAETHGSSAQALFYDRLDQLER
EFTVHRREIQAHMRQRQVPATQPSDWDAWHAACCADDAPRSVSQLPVRVQRALFDECVYQ
AEREAREARRRVERRLRHYADDLRYAFKHAHPPLDIRASFDDIYEQVRGMPEMQELVRMD
GGLDAARGAWAKYVRRQAERHADAPDSVPGARARTEYADLDDADPDRKRKDPVRAEDPRA
VRRRTEYDM
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaggtcgagtacaagaatgccaaggggcgcccctactggtaccaccccggcgag
cgtcggagtgtgtgggacaagcccgacgagctaaagacggcgcgcgagcgtgccatggag
accacagcgtggcgtgagtacaaatcgggtgagcgcagctactatgtgaacaaggagacc
aaggcatcgacgtggacgatgcccgcggacctcaaggccttcctcgataccatccccgac
gagccggcgccggcggtgccgggtcgcgcccccgcgagtccggcatcgggtgcagcgagc
ccaagtacgccacacacacccacattcacccagaccgccatggctgtggcagactcggcg
ggtacgggcacagccgtcgtgcggcctgcgcccacccaggcccgtaccagtacgcccatg
tacgcgacgcaggaggaggcagagagtgcgtttgtcgcgatgctgcgcacaaaagggatt
ggcgcacacgcgacgtgggagcaggtgctgcgtgacattatcacagagccgcgatacaag
gcgctgcgcacgctggaggagcgcaaggccacatttaaaaagtacgtcgaagagctgcag
gaactcgaggcggctcagcgtgaggagaagcttgcggagctgcgccctttcgtgctgcgg
gcgctgcagcagaatggcgggctgaaaccgtacgcgagctttgcgacgttcaagaagaag
ctagagcgacaccctgtctggcgcgactttgaggacgagtcgcaggcgcacgcgctcttt
gaggcgatccgccgcgacgtgcgcgagaaagatgcggcgcgcaagaagagtgtgcagcag
cataaccgctcagcgctcagtgcgctgctcaagaccatcgagatgacgcccatgacgctg
tggcaagacgtgcaccgcacgctggtcgagtcggaggagttccgccgagacgcacgcctg
cagaggatgccgcccgccgagatgctcgcgctgttcgaggagcatatggtatccgtcgaa
agggacgccgagcgcgcgctcgccacgcgcgaggagcctgtgcggcgcgagcgcgaggtg
cgcgacggcttccgggcgctgctccaagagcatgtggacgcaggcactctgcatgcgcga
tgtacatgggcgtcgttctatgcgcaggtacgtgacgacgagcggcttgcggccatggcc
gagacgcatggctcgagtgcacaagcactcttttatgaccgactggaccagctggagcgc
gagtttaccgtgcaccggcgcgagatccaggcgcacatgcggcagcggcaggtgccggct
acgcagccgagcgactgggacgcttggcatgctgcatgctgcgcggacgacgcaccgcgc
agcgtttcccagcttccggtgcgtgtgcagcgcgccttgtttgatgagtgtgtgtaccag
gcggagcgcgaggcgcgtgaggcgcgtcggcgcgtggagcggcgcctgcggcactatgcg
gacgatctgcggtacgcgttcaagcatgcgcacccgccgctggacatccgtgcatccttt
gatgacatctacgagcaggtacgcgggatgcccgagatgcaggagctcgtgcgcatggac
ggcggcctggacgccgcgcgcggggcgtgggccaagtatgtgcggcggcaggccgagcgg
catgcagatgcccctgactctgtgccgggcgcgcgcgcgcgcaccgagtatgccgatcta
gacgacgcggaccctgaccgcaagcgcaaggaccccgtgcgcgccgaggatccacgcgcg
gtgcgccgccgtaccgagtacgatatgtag
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