KEGG   Malassezia sympodialis: MSY001_0420
Entry
MSY001_0420       CDS       T06541                                 
Name
(RefSeq) uncharacterized protein
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
msym  Malassezia sympodialis
Brite
KEGG Orthology (KO) [BR:msym00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:msym03009]
    MSY001_0420
   04121 Ubiquitin system [BR:msym04121]
    MSY001_0420
Ribosome biogenesis [BR:msym03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    MSY001_0420
Ubiquitin system [BR:msym04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     MSY001_0420
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Sof1 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_DCAF12 NBCH_WD40 Beta-prop_SPT8 WD_LRWD1 WD40_RFWD3 Beta-prop_NUP159_NUP214 eIF2A Beta-prop_HPS5 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 30055305
NCBI-ProteinID: XP_018739052
UniProt: M5E5Q5
LinkDB
Position
Unknown
AA seq 503 aa
MWRAPSRRCRSLWLMKIKALTRSLDDHTPARLGDAAPVQRNLDPTMHPFDKPREYTRALN
AAKLDRLFAKPFVAALEGHIDGVYALARHPKRLDVLASGSGDGDIRLWDLNHQRCIFTYP
RAHAGIIQSLCISPLSFGSGAASKRMLSCSTDRTVKVWKADPVPEGLGDYAEYAEESDDD
EASGARDADLFSLRPREQPASEPLTVYNGKTAFHSLSHHAHLPRFASASSTVQIWDMNRG
GGSDPLLDMSMGVDAVHVVRYNQSETDVLASAGTDRGVTLYDVRSGQPLHKVVLTMRAND
IAWSPVEPTTFAVASEDHNMYTFDMRNLSSATQIYKGHVGAVMSVDWAPTGQSLVTGSYD
RTVRLWDVGKGARSRDVYHTKRMQKVFAVTYTLDARFVLSGSDDGNVRLWKHRASDKLGI
VNARERASREYAQALRARWNSVGDVAKIERQRHVPKPIRTAQKLQHTMTEARRVKEDRRR
RHTKSGTKKPKAARKHVVVEEKE
NT seq 1512 nt   +upstreamnt  +downstreamnt
atgtggcgcgcgcccagtcgacgctgtcgttcgctctggctgatgaaaattaaagcgctg
acgcgttcgctggacgaccatacgccggcccggctaggcgatgctgcgccggtgcagcgg
aatctagacccgaccatgcacccctttgacaagccacgagagtacacacgtgccctgaat
gcggccaagcttgaccggctgtttgccaagccgtttgtggcggcgctcgaagggcatatt
gatggcgtgtatgcgcttgcacgtcatccgaagcgcctagacgtgctggccagtggcagc
ggcgatggcgatatccggctatgggatctaaaccaccagcgctgcatcttcacatacccc
cgtgcgcatgcgggcatcatccaatcgctgtgcatttcacccctgtcgttcggaagtggt
gccgcatcgaagcgcatgctgtcatgctcgacagaccgcaccgtcaaggtgtggaaggcg
gaccctgtgccggagggtctgggcgactacgccgagtatgcggaggagagcgacgacgac
gaggcgtcgggtgcgcgcgatgcagacctgttcagtctgcgtccccgcgagcagcctgcg
agtgagccgctgaccgtgtacaatggcaagacggcgttccactcgctctcgcaccatgcg
caccttccgcggtttgcgtcggcgtcgagcacggtgcagatttgggacatgaaccgcggc
ggcggctcggaccccctgctcgacatgtccatgggtgtggacgccgtgcatgtggtgcgc
tacaaccagagcgaaacggatgtgctggccagcgccggcacggaccgaggtgtcacgctg
tacgacgtgcgcagtggccagcccttgcacaaggtggtgctaacgatgcgcgccaacgac
atagcatggtcgcccgtggagccaacgacctttgccgttgcgagcgaggaccacaacatg
tacacgttcgacatgcggaatctctcgtccgcgacgcagatctacaaggggcacgtcggc
gccgtcatgtccgtcgactgggcacccaccgggcagagcctcgttactggctcatacgac
cgcactgtgcgcctctgggacgtcggaaaaggcgcgcgctcgcgcgacgtgtaccatacg
aagcgcatgcagaaagtgtttgccgtgacctacacgctcgatgcgcgcttcgtgctgagt
ggctccgatgatggcaacgtgcggctatggaaacatcgcgccagcgacaagctgggcatc
gtcaatgcgcgcgagcgcgcgagccgcgagtacgcgcaggcgctgcgcgcccgctggaac
tcagtcggcgatgtggcgaagattgagcgccagcgccacgtgcccaagcctatacgcacg
gcccagaagctgcagcacaccatgaccgaggcacggcgcgtcaaggaggaccgccgccgc
cggcacacgaagagcggcaccaagaagccgaaggcggcgcgcaagcacgtggtagtggag
gagaaagagtag

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