KEGG   Malassezia sympodialis: MSY001_0711
Entry
MSY001_0711       CDS       T06541                                 
Name
(RefSeq) uncharacterized protein
  KO
K12605  CCR4-NOT transcription complex subunit 2
Organism
msym  Malassezia sympodialis
Pathway
msym03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:msym00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MSY001_0711
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msym03019]
    MSY001_0711
Messenger RNA biogenesis [BR:msym03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     MSY001_0711
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     MSY001_0711
SSDB
Motif
Pfam: NOT2_3_5_C
Other DBs
NCBI-GeneID: 30055596
NCBI-ProteinID: XP_018739327
LinkDB
Position
Unknown
AA seq 307 aa
MQSQSFGTQHHNILHRIGLAARSAHEPSALRSEAGSDPSAATVDAVRDGSARAAYMAASG
DEAALPIHQVLVSPVDRFGLVGLVNLLKTQDPDVAMLTMGNNLQSLGMNLDATESLHPSF
VTPWSQDPALASMQVEPAYQLPNCYNVQPPPPAQTKMASFSDETLFFIFYSTPRDVLQEV
AAQELYARNWRYHKGLHLWLTKEPNMEPLQKTPTYERGTYVFFDPASWDKVSKNFVLMYE
MLEEKPSSQSLLATASVHQGTPTLPAQVAGKALPSQPMSAVTVAAAAASARGSAQPSPSQ
GSPQTFS
NT seq 924 nt   +upstreamnt  +downstreamnt
atgcagtcacagtcgtttggcacgcagcaccacaatatccttcatcggatagggctggct
gcacgcagcgcgcatgagccgtctgctctgcggtccgaagcaggttctgacccatctgcg
gccacagttgatgcggtccgtgacggatcagcgcgtgcggcctacatggcggcgagtggc
gacgaggcggccttgcccatccaccaggtgctggtgtctcctgtggatcggttcgggctc
gtcggcttggtgaacctcctcaagacgcaggaccctgacgtggcgatgttaacgatgggc
aataacctgcagagtcttgggatgaatctggatgcgacagagagtctgcatccctcgttt
gtcacgccatggtcacaggacccagcactggcgtcgatgcaggttgagcctgcctatcag
ctgcctaactgctacaatgtgcagccaccaccaccagcgcagaccaaaatggcgagcttt
agcgacgagacgctctttttcatattctactcgacaccgcgcgatgtgctacaagaagtc
gcggcacaggaattgtacgcacggaactggcgataccacaagggcttgcatttgtggcta
acgaaggagccaaatatggagcctctgcaaaagacgcctacgtacgagcgcggcacctat
gtgtttttcgatcctgcctcgtgggacaaagtatccaagaactttgtactcatgtacgag
atgctcgaggaaaagccctcgtctcagagccttcttgccacagcctccgttcatcaaggg
acgccgaccctccctgcgcaagtggcaggcaaggccttgccgtcccagcctatgtccgct
gtaactgtagccgctgcggctgcctcagcgcgtggctcggcgcagccgtcgccgagccag
ggctcgccacagaccttttcgtag

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