Malassezia sympodialis: MSY001_0728
Help
Entry
MSY001_0728 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K12589
exosome complex component RRP42
Organism
msym
Malassezia sympodialis
Pathway
msym03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSY001_0728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msym03019
]
MSY001_0728
Messenger RNA biogenesis [BR:
msym03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MSY001_0728
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
MSY001_0728
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
30055613
NCBI-ProteinID:
XP_018739344
LinkDB
All DBs
Position
Unknown
AA seq
333 aa
AA seq
DB search
MAPVALSRAERSYVLDAQRSDGRGLRDVRPIQLESSMSQQADGSARVVLGSTEVMCGIKA
EVESYLCPHVGLEQDGEPSQQRFAPWLPPRPRIEVLVEYSPALLHEHSAPELGMITGTVQ
DMVQACFAPYGDKIGPFDARQFVVVPYAKFWRLYLDVYVLSWSGGNVLDAVFAAVFSALW
DVRIPVTQALSIDRASQGVSTDATDPAGMKFLTRGRQATGGAASSASSGTVTQAVDFALT
SEWDDGHTLYGREEVPVCVSVYPVQGTFLLDPTLEEESALSSSVVVFASQSGRVYGVRQR
GDASLSLSAVHEATDIGVYYARQLAQTLQGFLS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggcacccgtagcgctctcgcgcgctgagcggagctatgtgttggacgcgcagaggtcg
gatggaagaggtctgagggatgtgcgccccattcagctggaatcgtcgatgtcgcagcag
gctgatgggtcagcacgtgtggtgctgggcagcacggaggtgatgtgtggcatcaaggcc
gaggtggaatcttacttgtgcccccatgtgggcttagagcaggatggagagccatcacag
cagcgctttgctccatggctgccaccgcgtccgcgcattgaagtgctcgtcgagtattcg
cctgctcttttgcacgagcacagtgccccagagctcggcatgatcacaggtactgtgcag
gatatggtgcaagcgtgttttgctccatatggtgacaaaattgggccatttgatgcacga
caatttgtggtggtgccctatgccaagttttggcgtctgtatctcgacgtatatgtgcta
tcttggagcggcggtaatgtgctggacgctgtgtttgccgccgtgttctcagccctctgg
gatgtgcgtatcccagtgacacaggccctgtctattgatagggcctcgcagggtgtctct
acggatgccacggacccagccggcatgaagttcctcacgcgtggccgccaagcgacgggc
ggtgcagcgagctctgcgtccagcggcaccgtaacgcaggctgtggactttgccctgacg
agtgagtgggatgatgggcataccctatatgggcgcgaagaagtgccagtctgtgtgtct
gtgtaccctgtgcagggcacatttcttctggaccccacgctcgaggaagaaagtgcgcta
tcatcgagcgtggttgtattcgcgtctcagagtgggcgcgtgtacggtgtgcggcaacga
ggtgacgcatccctgagtctgtcggcggtgcatgaagcgacggacataggtgtgtactac
gcacggcaactcgcgcaaactctgcaaggctttttgtcgtag
DBGET
integrated database retrieval system