KEGG   Malassezia sympodialis: MSY001_0728
Entry
MSY001_0728       CDS       T06541                                 
Name
(RefSeq) uncharacterized protein
  KO
K12589  exosome complex component RRP42
Organism
msym  Malassezia sympodialis
Pathway
msym03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:msym00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MSY001_0728
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msym03019]
    MSY001_0728
Messenger RNA biogenesis [BR:msym03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     MSY001_0728
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     MSY001_0728
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 30055613
NCBI-ProteinID: XP_018739344
LinkDB
Position
Unknown
AA seq 333 aa
MAPVALSRAERSYVLDAQRSDGRGLRDVRPIQLESSMSQQADGSARVVLGSTEVMCGIKA
EVESYLCPHVGLEQDGEPSQQRFAPWLPPRPRIEVLVEYSPALLHEHSAPELGMITGTVQ
DMVQACFAPYGDKIGPFDARQFVVVPYAKFWRLYLDVYVLSWSGGNVLDAVFAAVFSALW
DVRIPVTQALSIDRASQGVSTDATDPAGMKFLTRGRQATGGAASSASSGTVTQAVDFALT
SEWDDGHTLYGREEVPVCVSVYPVQGTFLLDPTLEEESALSSSVVVFASQSGRVYGVRQR
GDASLSLSAVHEATDIGVYYARQLAQTLQGFLS
NT seq 1002 nt   +upstreamnt  +downstreamnt
atggcacccgtagcgctctcgcgcgctgagcggagctatgtgttggacgcgcagaggtcg
gatggaagaggtctgagggatgtgcgccccattcagctggaatcgtcgatgtcgcagcag
gctgatgggtcagcacgtgtggtgctgggcagcacggaggtgatgtgtggcatcaaggcc
gaggtggaatcttacttgtgcccccatgtgggcttagagcaggatggagagccatcacag
cagcgctttgctccatggctgccaccgcgtccgcgcattgaagtgctcgtcgagtattcg
cctgctcttttgcacgagcacagtgccccagagctcggcatgatcacaggtactgtgcag
gatatggtgcaagcgtgttttgctccatatggtgacaaaattgggccatttgatgcacga
caatttgtggtggtgccctatgccaagttttggcgtctgtatctcgacgtatatgtgcta
tcttggagcggcggtaatgtgctggacgctgtgtttgccgccgtgttctcagccctctgg
gatgtgcgtatcccagtgacacaggccctgtctattgatagggcctcgcagggtgtctct
acggatgccacggacccagccggcatgaagttcctcacgcgtggccgccaagcgacgggc
ggtgcagcgagctctgcgtccagcggcaccgtaacgcaggctgtggactttgccctgacg
agtgagtgggatgatgggcataccctatatgggcgcgaagaagtgccagtctgtgtgtct
gtgtaccctgtgcagggcacatttcttctggaccccacgctcgaggaagaaagtgcgcta
tcatcgagcgtggttgtattcgcgtctcagagtgggcgcgtgtacggtgtgcggcaacga
ggtgacgcatccctgagtctgtcggcggtgcatgaagcgacggacataggtgtgtactac
gcacggcaactcgcgcaaactctgcaaggctttttgtcgtag

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