Malassezia sympodialis: MSY001_0776
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Entry
MSY001_0776 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
msym
Malassezia sympodialis
Pathway
msym03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MSY001_0776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msym03019
]
MSY001_0776
Enzymes [BR:
msym01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
MSY001_0776
Messenger RNA biogenesis [BR:
msym03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
MSY001_0776
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
MMR_HSR1
AAA_16
Dynamin_N
AAA_28
Pro_CA
Septin
ABC_tran
AAA_33
AAA_29
Motif
Other DBs
NCBI-GeneID:
30055661
NCBI-ProteinID:
XP_018739392
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MSGEASRRVQLPPRSEYRIELDSNETVAIRFVSNALTGHYGDAEVFGAPLVAGTQERWYT
FGNEAKFAISTWGGAEIEIIGQASTEYMADEPSPFYTYGANLHLNLERARLRAREQLRTD
HSLLQQLEEFDVNIHKVPPSFESDGPLDPRDPYRAAGQGPRVMVVGPASAGKSTLIKFLA
NYALRSPALASVKEGEEAKRRTREQEGHHDDSDEEAQNEEAGDKPLSEITGWWPMIVTLD
PAEGAVPIPGCVSAIPLNPTPSNTLPSPSPALPYGVTPETTGALPPGVSTVHSVMPLSLW
MGKQNVRENERHSRRIVDWLAFHIEKRMAKDMRSRMSGLLIDTPGVITADARTRYAFIQY
CVRALKVDTVVVVGHDKLNLELTRIYANIPTGSAPQIVKIPRSGGAVEVDEVYQQKLHDL
QIRSYFYGMPLCRPRELSSEESGAAAALGLDEPLGGVPSLNPYSSTIPFDLLQIYRVGQD
RVAPSSALPIGAERALSEMQVVKLDPVNSSSDLSMLLQSVLALVETPPPREGADGKAEGE
YTDDELLGASLLGFVHVYVVTLRLT
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcgaggcttcgcggcgtgtgcaacttccgccacgctcagaataccgcatcgaa
ctggattcgaacgagaccgtggccatacgctttgtctcaaatgcacttacaggtcattat
ggagatgcagaagtgtttggcgcaccactggtagctggtacccaagagcgctggtacacc
tttggcaatgaggccaaattcgccatatccacctggggcggggctgaaattgaaatcatt
ggtcaagcctctactgaatatatggccgatgagccgtcgcctttctatacctatggtgcc
aacttgcacctcaatttggaacgggctcgtctccgtgcacgagagcagctacgtacagat
cactcgctcttgcaacagcttgaagaattcgacgttaacattcacaaggtgccaccatcg
tttgaaagcgatggcccacttgaccccagagatccatatcgtgccgctggacaaggcccg
cgtgtgatggtcgtgggtcctgccagtgccggcaagtctacactgatcaaattcttggct
aactatgcgctgcgttcacctgctttagcgagtgtaaaagaaggtgaagaagcaaaacgg
cgcacgagagagcaagaggggcatcatgacgattcagacgaagaagctcaaaacgaggag
gccggtgacaaaccgctgagtgaaatcacgggatggtggcccatgattgtgacgctagac
cctgcagaaggcgctgtgcccatacctggatgtgtcagtgccatcccactgaatcccaca
ccttccaacactctaccatccccttcgcctgctctaccctatggtgtgacgcctgagacc
accggagccttgcctccaggtgtatctacggtgcacagtgtgatgcccctctctttatgg
atggggaaacaaaatgtgcgcgagaatgagcgacactcacggcgcattgtcgactggcta
gccttccatatcgagaaacgcatggccaaggatatgcgatctcgaatgtcgggccttctc
attgatacgcccggtgtgatcacggcggatgcgcgcactcgctatgcttttatccaatac
tgcgttcgcgcgttgaaggtggacactgtcgtcgtcgtaggccacgacaagctcaacttg
gagctcacccgtatctatgctaacattccgactggcagtgcgccccaaattgtcaagatt
cctcgctcgggtggcgctgtggaagttgatgaggtgtatcaacagaagctgcatgatctt
caaattcgatcctacttttatggtatgcccctgtgtcgaccgcgtgagctgagctctgag
gagagtggagcggcggcagctttgggacttgacgagcccttgggcggggttccttcgctg
aatccctactcttccacgattccctttgatctactgcagatctatcgcgttggccaagac
cgcgtggcaccatcctcggcactacctattggagctgagcgcgctctatctgaaatgcaa
gtggtcaagctcgatccggtaaactcatcaagtgacttgtctatgctgctgcagtctgtc
ttggctttggtggaaactccgccacctagggagggtgcagatgggaaagcggaaggagaa
tacaccgatgacgaactgttgggcgctagtctgcttggttttgtgcatgtgtacgttgtg
actctccggcttacttga
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