KEGG   Malassezia sympodialis: MSY001_0824
Entry
MSY001_0824       CDS       T06541                                 
Name
(RefSeq) uncharacterized protein
  KO
K07573  exosome complex component CSL4
Organism
msym  Malassezia sympodialis
Pathway
msym03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:msym00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MSY001_0824
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msym03019]
    MSY001_0824
Messenger RNA biogenesis [BR:msym03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     MSY001_0824
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     MSY001_0824
SSDB
Motif
Pfam: EXOSC1 S1_RRP5 ECR1_N
Other DBs
NCBI-GeneID: 30055709
NCBI-ProteinID: XP_018739439
LinkDB
Position
Unknown
AA seq 214 aa
MLHDRALLLPGQPLPLAQGARVQAGDGTYAYGDYVMASRIGPPGTVRVQGTRPPLVLPRP
ESVVLGRVTRVTPRQATISILVVDGQPCGGAQAASVGARTNHAAGEGIDGSEFQGLVRAQ
DVRTTDKDNVVLSECFRPGDIVRAVVLSLGDARSYYLSTARNDLGVVHATGGRTANGGWA
PARHTLQPISWREMADPVTGAVERRKCAKPEWLN
NT seq 645 nt   +upstreamnt  +downstreamnt
atgctccacgaccgggcgctcctgctgccggggcagccgctgccgctcgcgcagggcgcg
cgtgtgcaggcgggcgacggcacgtatgcatatggtgactatgtcatggcgagtcgtatt
ggcccacctggcacggtgcgtgtgcagggtacacgcccgccgctcgtgctgccgcggcca
gagagcgtcgtgctggggcgcgtgacgcgcgtgacgccgcgacaggcgacgatctcgatt
cttgtggtcgatgggcagccgtgtggtggtgcgcaggccgcgagcgtgggcgcccgcacg
aaccatgcggccggggaaggcattgacgggagcgagtttcagggcctggtgcgtgcgcag
gacgtgcgcacgaccgacaaggacaacgtcgtgctgagcgagtgtttccgccctggcgac
attgtgcgcgcagtggtcctctctctgggcgatgcgcgctcctactacttgtctacggcg
cgcaacgacctcggtgtcgtacacgcgacgggcgggcgcaccgccaacggcggctgggcg
ccggcgcggcacacgctgcagcccatctcgtggcgcgagatggccgaccccgtgacgggc
gcggtggagcgacgcaagtgcgcgaagccggagtggctcaactag

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