Malassezia sympodialis: MSY001_0824
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Entry
MSY001_0824 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K07573
exosome complex component CSL4
Organism
msym
Malassezia sympodialis
Pathway
msym03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSY001_0824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msym03019
]
MSY001_0824
Messenger RNA biogenesis [BR:
msym03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MSY001_0824
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
MSY001_0824
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
S1_RRP5
ECR1_N
Motif
Other DBs
NCBI-GeneID:
30055709
NCBI-ProteinID:
XP_018739439
LinkDB
All DBs
Position
Unknown
AA seq
214 aa
AA seq
DB search
MLHDRALLLPGQPLPLAQGARVQAGDGTYAYGDYVMASRIGPPGTVRVQGTRPPLVLPRP
ESVVLGRVTRVTPRQATISILVVDGQPCGGAQAASVGARTNHAAGEGIDGSEFQGLVRAQ
DVRTTDKDNVVLSECFRPGDIVRAVVLSLGDARSYYLSTARNDLGVVHATGGRTANGGWA
PARHTLQPISWREMADPVTGAVERRKCAKPEWLN
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgctccacgaccgggcgctcctgctgccggggcagccgctgccgctcgcgcagggcgcg
cgtgtgcaggcgggcgacggcacgtatgcatatggtgactatgtcatggcgagtcgtatt
ggcccacctggcacggtgcgtgtgcagggtacacgcccgccgctcgtgctgccgcggcca
gagagcgtcgtgctggggcgcgtgacgcgcgtgacgccgcgacaggcgacgatctcgatt
cttgtggtcgatgggcagccgtgtggtggtgcgcaggccgcgagcgtgggcgcccgcacg
aaccatgcggccggggaaggcattgacgggagcgagtttcagggcctggtgcgtgcgcag
gacgtgcgcacgaccgacaaggacaacgtcgtgctgagcgagtgtttccgccctggcgac
attgtgcgcgcagtggtcctctctctgggcgatgcgcgctcctactacttgtctacggcg
cgcaacgacctcggtgtcgtacacgcgacgggcgggcgcaccgccaacggcggctgggcg
ccggcgcggcacacgctgcagcccatctcgtggcgcgagatggccgaccccgtgacgggc
gcggtggagcgacgcaagtgcgcgaagccggagtggctcaactag
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