Malassezia sympodialis: MSY001_0831 Help Entry MSY001_0831       CDS       T06541                                  Name (RefSeq) uncharacterized protein   KO K03010   DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] Organism msym  Malassezia sympodialis Pathway msym03020   RNA polymerase msym03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:msym00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     MSY001_0831   09124 Replication and repair    03420 Nucleotide excision repair     MSY001_0831  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:msym03021]     MSY001_0831    03400 DNA repair and recombination proteins [BR:msym03400]     MSY001_0831 Enzymes [BR:msym01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      MSY001_0831 Transcription machinery [BR:msym03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      MSY001_0831 DNA repair and recombination proteins [BR:msym03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       MSY001_0831 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 Motif Other DBs NCBI-GeneID:  30055716 NCBI-ProteinID:  XP_018739446 UniProt:  M5E5X9 LinkDB All DBs Position Unknown AA seq 1197 aa AA seqDB search MYADEEVEEISQEDCWDVIKAFFEEKGLVRQQIDSFNEFMSNTVQELVEESRSLTLEQSD QHTGHAEDKSRRYEIEFGQIYMNKPQQTEADGSTAPLFPQEARQRNLTYSAGLHVDVSQK VLVKGEEGELDENGDQLWVPDPSREEIVDEKVYLGKVPIMLHSHFCWLTDLPDDGKYSLN ECPFDSGGYFIINGSEKVLIAQERMAANHVYVFSKAPPSPITFLAEIRSAVERGGKTIST MQVKLFSRNREKSLNNTIKATLPYIRNDIPIVIVFRALGVVPDREVLQHICYDFNDTQML EMLKPCIEEAFVIQDREVALDFIGRRGTTTGLSRFKRTTYAQEILQKEMLPHISMSEGSN TKKAYFFGYMVHRLLLAALDRREIDDRDHFGKKRLDLAGPLLSGLFRMLFRKVTRDIYRH LQRCVEDQKEFHLQAAVRHATITNGLRYSLATGNWGDQKKAMQSKAGVSQVLNRYTFAST LSHLRRCNTPIGRDGKIAKPRQLHNTHWGMVCPAETPEGQACGLVKNLSLMSNISVGTPS APIVEFLEEFGLNSLVDMQAADPKATKVFVNGVWLGTHDDPGQLVDTLRDLRRKDDISYE VSVVRDIREKELRIYTDAGRMLRPLFIVDQQSMTLLIKRHHVRALNDEDGEGWDWTRLVQ SGVIEYLDTEEEETVLICMSPTDLEQSREYKATNGHMPPDTSDATRRLRSAHTFAPDTWT HCEIHPAMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGVFLTNYQIRMDTMANILYYP QKPLATTRAMEHLRFRELPAGQNAIVAILCYSGYNQEDSVIMNQSAIDRGLFRSLYYRTF QDMEKKVGVITMEEFEKPTRETAIRLKHGTYEKLDIDGLVPPGTRVSGEDIIIGKTAPLP PDSDELGMRSKTHTKKDVSTPMKSTESGIIDQVLITTNGEGAKFVKVRVRSTRVPQVGDK FASRHGQKGTIGITYRQEDLPFTAEGITPDIIINPHAIPSRMTIGHLVECLLSKVATLSG QEGDATPFTDLTVKGVSDILFSLGYQSRGLEVMYNGHTGRKLQAQVYLGPTYYQRLKHMV DDKIHSRARGPVQILTRQPVEGRSRDGGLRFGEMERDCMISHGMANFLKERMYDASDAYR LHICDLCGLTAVANLRKSTFECRACRNRSAISQIHIPYAAKLLFQELMSMGIATRLY NT seq 3594 nt NT seq  +upstreamnt  +downstreamnt atgtacgcagatgaagaggtggaagagatcagccaagaagattgctgggacgtcatcaag gcctttttcgaagagaagggcctggtgcgccagcaaattgacagtttcaacgagttcatg agtaacacagtgcaggaactcgttgaagagagtcgaagtctgaccttggaacagagtgac cagcacactggccacgcggaggacaagtcgcgtcggtacgagattgagtttggtcagatc tacatgaacaagccgcaacagactgaggcagatggtagcacagctcccctctttccccaa gaggctcgccagcgtaacttgacgtactcggcgggtctgcatgtggatgtctctcagaag gtcttggtcaagggcgaggaaggcgagctggatgagaacggtgaccagctttgggtgcct gatccgagccgcgaggagattgtcgatgagaaggtgtatcttggcaaggtccctatcatg ctgcactcacacttttgctggctgacggacctgccggacgatggcaagtacagtttgaac gagtgccctttcgactcgggtggctactttatcattaatggctctgaaaaagtactgatt gctcaggagcgcatggcggcgaaccatgtgtatgtgttttccaaggctcccccttcgccc atcacgttccttgccgagatccgcagtgctgtggagcggggtggcaagacgatcagcacc atgcaggtaaaactgttctcgcgcaaccgtgagaagagcttgaacaacacgatcaaggca acgctgccttacatccgcaatgacatcccgatcgtgattgtcttccgtgcgctgggtgtt gtgcctgaccgcgaagtgttgcaacacatttgctacgacttcaatgatacacagatgcta gagatgctcaagccctgcattgaagaggcctttgtgatccaggatcgtgaggttgcgctc gactttattggtcgtcgtggcacgaccacaggtctttcacgctttaagcgcacgacctat gcccaggagattctgcaaaaggagatgcttccccacatttccatgtccgaaggatcgaat acgaagaaggcctacttcttcgggtacatggtgcaccgcctcctgctcgccgcgctggac cgccgcgagatagatgaccgtgaccactttggcaagaagcgcctggacttggcgggtccc ctgctgagtggcctgttccgcatgcttttccgcaaagtcacccgcgacatttaccggcac ttgcagcgctgtgtggaagaccagaaggagttccacctgcaggcagcggtgcgtcatgcg accatcaccaatggtttgcgctactcactggctacgggtaattggggtgatcaaaagaaa gcgatgcagtccaaggcgggtgtgtcgcaggtgctgaaccgatatacgtttgcatcgacc ctgtcgcacttgcggcgttgtaacacgcctattggacgggatggcaaaatcgcaaagccg cggcaactgcacaatacgcattggggtatggtgtgccccgccgagacgcccgagggccaa gcgtgtgggctggtgaagaatttaagtctcatgtcgaacatctctgtcggcacaccatct gcaccgattgttgagttcttggaggagtttgggctgaatagtctcgtggacatgcaggcg gcggaccccaaggcgaccaaggtatttgtgaacggtgtatggctgggtacacacgacgat cctggccagcttgttgatacgctgcgcgatttgcgccgcaaagacgacattagctacgaa gtgagtgtggtgcgtgacatccgtgagaaggagctgcgtatctacacggatgcaggtcgt atgctgcgcccgctgttcattgtggaccagcagagcatgacgctgctgatcaagcgacac catgtgcgggcgctcaacgacgaggacggcgagggctgggactggacgcgcctggtccag tctggcgtcattgaatatctggacacagaggaagaggagacggtgctgatctgcatgagt ccaacggatctggagcagtcgcgcgagtacaaggcgaccaacggccacatgccaccggac acgtcggacgcaacgcggcgtctgcgatcggcgcatacctttgcgcccgacacgtggacg cactgtgagattcacccggcgatgattctgggtgtgtgtgcgagcattattccattcccc gaccacaaccagtcgccgcgtaacacgtaccaatcggccatgggcaagcaagctatgggt gtctttttgaccaactaccagattcgcatggatacgatggcgaacatcttgtactatcca caaaagccgctggccacgacacgtgcgatggagcacctgcgcttccgcgagctgccagcg ggccagaatgccattgtggccattctttgctattcgggctacaaccaggaggactccgtg attatgaaccagtcggctattgaccggggtctgttccgctcgctgtactatcgcacgttc caggacatggagaagaaggtcggtgtgatcacaatggaggagtttgagaaaccgacacgc gagacggccatccgcctgaaacatggcacgtacgagaaactagatatcgatggtctcgtt ccacctggcacgcgtgtttcaggcgaggacatcattattggtaaaacggcgccattgccg ccggatagtgatgagctgggtatgcgcagcaagacgcacacgaagaaggatgtgagtacg ccgatgaagagcactgagagtggcatcattgaccaggtgctgatcacgaccaacggcgaa ggtgccaagtttgtgaaggtgcgtgtgcgttcgacgcgtgtgccgcaggtgggcgacaaa tttgcgtcgcgccacggacagaagggtaccattggcatcacgtaccgccaggaagatctg ccgttcacggctgagggtattacgcccgacattatcatcaacccgcacgccatccccagt cgtatgaccatcgggcatctggtcgagtgtctgctgtcgaaggtggcaacgctctcgggc caagagggcgatgcgacgccgtttactgacctcactgttaagggcgtgagtgacattttg ttctcgctgggctaccagtcgcgtggtctcgaggtcatgtacaatggccacacgggccgc aagctgcaggcgcaggtgtatctgggcccgacatactaccagcgtctgaagcacatggtg gacgacaagatccacagccgcgcgcgcggtcccgtgcagattcttacgcggcagcctgtc gagggtcgcagccgcgacggtggtctgcgttttggtgagatggagcgcgactgtatgatc tcacacggtatggccaactttttgaaggagcgcatgtatgatgcaagcgatgcgtaccgc ctgcacatctgcgatctgtgcggcttaacagcggtggcgaacttacgcaagtcaacgttc gagtgccgcgcatgtcgcaaccgctcagccatttcgcagatccacattccctatgcggcc aagctcctgttccaagagctgatgagcatgggcattgcgactcgcttgtactag

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