Malassezia sympodialis: MSY001_0854 Help Entry MSY001_0854       CDS       T06541                                  Name (RefSeq) uncharacterized protein   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism msym  Malassezia sympodialis Pathway msym03018   RNA degradation Brite KEGG Orthology (KO) [BR:msym00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     MSY001_0854  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:msym03019]     MSY001_0854 Enzymes [BR:msym01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      MSY001_0854 Messenger RNA biogenesis [BR:msym03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      MSY001_0854   mRNA degradation factors    3'-5' decay     Ski complex      MSY001_0854 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DSHCT Ski2_N DEAD MTR4-like_stalk MTR4_beta-barrel Helicase_C RbcX Motif Other DBs NCBI-GeneID:  30055739 NCBI-ProteinID:  XP_018739469 LinkDB All DBs Position Unknown AA seq 1339 aa AA seqDB search MTNELDHIFASLPTDPARKRKRGAPGAATHGDDRAPPHKRAGTASAPASEERGDAADAAR RPKAPPSAASASSDTPTDGSKNARAAESKADAPRRRTPVVVHDTSAPARASAPVQPRARP SDDDDAAFADSRGRDRIGGLSFSTATMDALWAELALVPGSEADKRRAEIEEALLMPSCEL ARSWMLDAQQHWARPTRFETMLALDPSPSTTSLQFVRSGLEGRVVGYSEVVSGASLHELD GSSLSLHRPVSTQKSFVRGSTSSMPFRPGGLEDAVAADEPDKRPSGALRTVPPGFSRGLA LSHAPLDESVPTWRDDLSQASPAHLDRTVITVDKEGLYKMPETAPQAQNDDALVDELLPE ESLPRIFQSVTKAPSEERREWAHMIHTSKQMTNFHELVPVMAHEYPFELDTFQKQAVYHL EQSDSVFVAAHTSAGKTVVAEYAIALATKHMTRCIYTSPIKALSNQKFREFKHTFGAENV GILTGDVQINPEATCLIMTTEILRSMRARRRVGGGDHSPAGAHQYCAPLGDRAQYAGYVG RLTPEFADWVGRTKKKDVYVISTPKRPVPLEHFLFAGKELFKVVDAQGRFFAKGVHDAAD ALRSKQEREGTAPGASAPAARGGXRGGPPGRGRGAPQGRGGYGQVARRPGQATDKSLWVH LVGLLRKRSLLPVVVFVFSKRRCEEYADALPNTDLCHASEKSEVHVVIERSLSRLKDVDR NLPQITRMRSLLSRGIGVHHSGLLPIVKELVELLFQRGLVKVLFATETFAMGVNMPARSV VFSGIRKHDGQGFRNLLPGEYTQMSGRAGRRGLDATGVVIVIAEDPDVHTLNHMMLGQST KLKSQFRITYSMVLNLLRIEALKVEEMIKRSFSENATQRLRPEQEKTLQNLQSKRAAMEP ELAACTLPLDELERLYDLSVQATRLSDACLALAAHHSQGAKMLASGRVVLVREGTYGFAP AFLVRPLTGQRFLALLALTPGQRGSRARSDALPLWISSAFTAQLAQGEWVAEAREIPLSS VVLVTSITASIPSASIQSRRPSALRRALELLRPPMAAIHAHLASASEPAGYAVLGLEVDW SRMRRMDFQDAQRERNAVLAELAQVQSLMDSPEFLREYQVMHRRKRLELDMARVRASLSS ENLDLLPDYHQRIDVLKALRFIDPDSETVLLKGRVACEIRSANELILTELLLDNTFVEYA PEEIAALLSVFHFKDKTSVEPELTPTLREGYQRIVDTADRVAAVQLAHQLNAEDDASTMH MGLMQVVYEWARGMHFNDIMQLTDVGEGTIVRCITRLDETFREVRDASRVIGDMDLLEKM ETCQQLIRRDIVFAASLYF NT seq 4020 nt NT seq  +upstreamnt  +downstreamnt atgacgaacgagctcgaccacatctttgcctccctgcccacggaccctgcgcgcaagcgc aagcgcggtgcgccgggggcagcgactcacggagacgatcgtgcgccgccgcacaagcgc gcaggtactgcatcggcgcccgcgtccgaggaacgcggggacgccgcggacgctgcgcgc cgccccaaggcgccgccgagcgctgcgtctgcgtcgtcggatacgccgacggatggcagc aagaatgcgcgcgccgctgagtccaaggccgacgcgccgcgccgtcgtacgcctgtcgtg gtgcacgacacatcggcgcctgcacgcgctagcgctcctgtgcagccgcgcgcgcgtccc tcggacgacgacgacgcggcgtttgccgactcgcgtggccgggatcgtatcggtggcctc tccttctcgaccgccacgatggacgcgctgtgggccgagctggcgctcgtgccggggtcc gaggcggacaagcgccgcgcggagatcgaggaagcgctgctgatgccttcgtgtgagctg gcgcgttcgtggatgctcgacgcgcagcagcactgggcgcggccgacgcgcttcgagacg atgctggctctcgatccgtcgcccagcacaacgtcgctgcagtttgtgcgctccggcctc gagggccgggtcgtcggctactcggaggtcgtatctggtgcctcgctgcacgagctggac ggctcgtcgctctcgctgcaccgccccgtgtcgacgcaaaagagctttgtgcgtggctcg acgtcgtctatgccgttccgccctggcggcctcgaagacgctgtggcggcggacgagccg gacaagcgcccgtcgggcgcgctgcgcaccgtcccgcctggcttctcgcgcggcctggcg ctctcgcacgcgccgctggatgagagtgtgccgacgtggcgggacgacctctcgcaggcg tcgccggcgcacctggaccgcacggtcattacggtggacaaggagggtctgtacaagatg cccgagactgcgccgcaggcgcagaacgacgacgccctcgtggacgagctgctcccggag gagtcgctgccgcgcatcttccagagtgtgaccaaggcgccgagcgaggagcgccgcgag tgggcgcacatgatccacacgtcgaagcagatgaccaatttccacgagctcgtgccggtc atggcgcacgagtatccgttcgagctcgataccttccagaagcaggccgtgtatcacctc gagcagagcgactcggtgtttgtggccgcgcacacctcggccggcaagacggtcgtggca gagtacgccattgccctcgcgaccaagcacatgacgcgctgcatctacacgtcgcccatc aaggcgctctcgaaccaaaagttccgcgagttcaagcacacgtttggcgcggagaatgtc ggtattctgaccggcgacgtgcagatcaaccccgaggctacctgcctcattatgacgacc gagattctgcgcagcatgcgagcgcggcgtcgtgtgggaggaggtgatcattctcctgcc ggcgcacatcaatattgtgctcctctcggcgaccgtgcccaatacgcagggtacgtgggt cgactaacgccagaattcgccgactgggtgggccgcacgaagaagaaggacgtgtatgtg atatcgacgcccaaacgtccggtgccgctcgagcactttctgtttgcgggcaaggagctg ttcaaggtcgtcgatgcacagggccgcttcttcgcgaagggcgtgcacgacgcggccgac gccctgcgctcgaagcaggagcgcgagggcacagcgccaggcgcctcggcgcccgcggcg cgcggcggccngcgcggcgggccgccgggccgtggacgcggtgcgccgcagggccgcggc ggctatggccaagtggcgcggcgcccgggccaggccaccgacaagtcgctgtgggtgcac ctcgtcggcctcctgcgcaagcgctcgctgcttcctgtcgtcgtgtttgtgttcagcaag cggcggtgcgaggagtatgcggatgcgttgcccaacacggacctgtgccatgcgagcgag aagagcgaggtgcacgtcgtgatcgagcgcagcctctcgcgcctcaaggacgtcgaccgc aacctgccgcagattacgcgcatgcgctcgctgctgagccgcgggatcggtgtgcaccac agtggtctactgcccattgtcaaggagctcgtcgagctcctcttccagcgcggccttgtc aaggtcctgttcgcgaccgagacgttcgccatgggcgtcaacatgcccgcgcgctccgtt gtgttcagcggcatccgcaagcacgacgggcagggcttccgcaacctgctcccgggcgag tacacacagatgtccggccgcgcgggtcgtcgcggcctggacgcgacgggcgtggtgatc gtgatcgccgaggaccccgacgtgcacacgctgaaccacatgatgctgggccagtcgacc aagctcaagtcgcagttccgcatcacctacagcatggtactcaacttgctgcgcatcgag gcgctcaaagtcgaggagatgatcaagcgctccttctcggagaacgcgacgcagcgcctg cggcccgagcaggaaaagacgctgcagaacctgcagtcgaagcgcgcggcgatggagcca gagctcgcggcgtgcaccctgccgttggacgagctcgagcgcctgtacgacctctcggtg caggcgacgcgcctcagcgacgcatgcctcgcgctcgctgcgcaccactcgcagggcgcc aagatgctggcgtcggggcgtgtcgtgctggtgcgcgagggcacctatgggtttgcgccc gcgttcctcgtgcgtccgctgacgggccagcgcttccttgcgctgcttgcgctcacgccg ggccagcgtggctcgcgggcgcgcagcgacgcgctgccgctctggatctcgtcggccttc accgcgcagctcgcccagggcgagtgggtcgcggaagcacgcgagatccctctgtcgagc gtggtgctcgtcacgtcgatcaccgcgtcgattcccagcgcgtcgatccagtcgcggcgt ccgtcggcgctgcggcgcgcgcttgagctgctgcgcccgccgatggccgcgatccacgcg cacctggcttccgcgtcggagccggccggctacgcggtgctcggcctcgaagtcgactgg tcgcgcatgcgccgcatggacttccaggacgcgcagcgcgagcgcaatgcagtgctggcg gagctcgcgcaggtgcagagcctcatggactcgcccgagttcctgcgcgagtaccaggtg atgcaccgccgcaagcggctcgagctggacatggcgcgcgtgcgtgcctcgctgtcgagc gagaatctggatttgctgcccgactaccaccagcgcatcgacgtgctcaaggcgctgcgc tttatcgatcccgactcggagacggtgctgctcaaggggcgcgtcgcatgcgaaattcgc agcgccaacgagctgatcctcacagagctcctgctcgacaacacgtttgtcgagtatgcg cctgaggagattgcggcgctgctcagcgtgttccacttcaaggacaagacaagcgtcgag ccggagctgacgccgacgctccgcgaaggataccagcgcatcgtcgatacggccgaccgt gtggcggctgtgcagctagcgcaccagctgaacgcggaagacgacgcgtcgacgatgcac atgggcctcatgcaggtcgtatacgaatgggcacgcggtatgcacttcaacgacattatg cagctcacagacgtgggcgagggcaccattgtgcgctgcatcacgcgcctcgacgagacg ttccgcgaggtgcgcgatgcgtctcgcgtgattggcgacatggacctgctggaaaaaatg gagacgtgccagcagctgatccgccgcgacattgtgtttgcagccagtctctatttctag

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