KEGG   Malassezia sympodialis: MSY001_0952
Entry
MSY001_0952       CDS       T06541                                 
Name
(RefSeq) uncharacterized protein
  KO
K10755  replication factor C subunit 2/4
Organism
msym  Malassezia sympodialis
Pathway
msym03030  DNA replication
msym03410  Base excision repair
msym03420  Nucleotide excision repair
msym03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:msym00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSY001_0952
   03410 Base excision repair
    MSY001_0952
   03420 Nucleotide excision repair
    MSY001_0952
   03430 Mismatch repair
    MSY001_0952
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msym03032]
    MSY001_0952
   03036 Chromosome and associated proteins [BR:msym03036]
    MSY001_0952
   03400 DNA repair and recombination proteins [BR:msym03400]
    MSY001_0952
DNA replication proteins [BR:msym03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    MSY001_0952
  DNA Replication Termination Factors
   ELG1-RFC complex
    MSY001_0952
Chromosome and associated proteins [BR:msym03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    MSY001_0952
DNA repair and recombination proteins [BR:msym03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     MSY001_0952
  Check point factors
   HRAD17(Rad24)-RFC complex
    MSY001_0952
SSDB
Motif
Pfam: Rep_fac_C DNA_pol3_delta2 RCF1-5-like_lid AAA Gp44_lid DNAX_ATPase_lid AAA_assoc_2 PPR_1
Other DBs
NCBI-GeneID: 30055837
NCBI-ProteinID: XP_018739565
LinkDB
Position
Unknown
AA seq 268 aa
MPLTTGTCSLLTRSGIDVVRNKIKVFAQKKVSLPPNRHKIIILDEADSMTPGAQQALRRT
MEIYAPTTRFCFACNQSNKIIEPIQSRCAILRFGRVSDEEVLRRLLEICEAEKVQYSDEG
LAAVVFTAEGDMRQAINNLQSTWTGLGFVSPDHVFQVCDQPHPLVVREILEHCHAGRVDE
ALDKLDEVWELGYSCLDIVTTLFRVVKTMDSLPESVQLDFIRVRRMHSPQAIGWTHMRTL
EGVATHLQLSGLIARLSQTAMDPAHLSL
NT seq 807 nt   +upstreamnt  +downstreamnt
atgcctctgacgaccggtacgtgctcgctgctcacacgcagtggcatcgacgttgtgcgc
aacaagatcaaggtgtttgcgcagaagaaggtgtcgctgccgccgaaccggcacaagatc
atcattctcgacgaggcggacagcatgacgccgggtgcgcagcaggcgctgcgtcgcacg
atggagatctacgcgccaacgacgcgcttctgctttgcgtgcaaccagtcgaacaagatc
attgagccgatccagagccgctgtgcgattcttcggttcggccgcgtgtcggacgaggag
gtgctgcgccgcctgctcgagatctgtgaggctgagaaggtgcagtactcggacgaaggc
ctcgcggccgtcgtgttcaccgccgagggcgacatgcggcaggcgatcaacaacttgcag
tcgacgtggacgggcctgggctttgtgagccccgaccatgtgttccaggtgtgcgaccag
ccgcaccccctcgtcgtgcgcgagatcctggagcactgccacgcggggcgcgtggacgag
gcgctcgacaagctcgacgaggtatgggagctcggctactcgtgcctcgatattgtcacg
acgctcttccgcgtcgtcaagacgatggactcgctgcccgagtcggtccagctcgacttt
attcgcgtacgtcgcatgcactcaccgcaggccatcggctggacgcacatgcgcacgctc
gagggtgtcgcgacgcacctgcagctcagtggcctcattgcgcgcctcagccaaacggcg
atggatcccgcccacttgtcgctatag

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