KEGG   Malassezia sympodialis: MSY001_1226
Entry
MSY001_1226       CDS       T06541                                 
Name
(RefSeq) uncharacterized protein
  KO
K12580  CCR4-NOT transcription complex subunit 3
Organism
msym  Malassezia sympodialis
Pathway
msym03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:msym00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MSY001_1226
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msym03019]
    MSY001_1226
Messenger RNA biogenesis [BR:msym03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     MSY001_1226
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     MSY001_1226
SSDB
Motif
Pfam: Not3 NOT2_3_5_C WKF
Other DBs
NCBI-GeneID: 30056111
NCBI-ProteinID: XP_018739824
LinkDB
Position
Unknown
AA seq 568 aa
MAARKLQSRSTIQLTATAEIDRTFKKVAEGVELFEGLYDKLQTSPNPGHKEKLESDLKTQ
IKKLQRLRDQIKTWLQSSDIKDKKPLLDHRRLIETQMEKFKAAEKEMKTKAFSKEGLIAA
AKLGPEEKAKLEMSNWLTSMVDELSRQIEAAEAEIEQMMATSKKSKKSTSKEDRAGTLEH
QNERRQWHISRLEILLRMLENGSLEVDQINDIKEDISYFVESNAEEDFEEDEGIYDEFNL
DEEEEAFGLRDAEEEKIESPPTPPPAPAPEEPVAKAAAKETKKDEVPPPKAKDEKEKKAK
KAATTASGKLQPTSLPVPPPAHKTPAPAATLPPIRYAAAAAAAVATTPAAGAPSPSTAVP
VPASETAADTSATDVPVEAEGDVSAASADASGAAPARSDARLPDTLSDLVTSFEWAKQKA
LLRDSNLSHVQRSLDASYAGGAPEPVDSESPKHYVPKDPFPTPSYYPQSPASLFDNPALY
AKFDVDTLFYIFYYQQGTYHQYLAARELKKQSWRFHKQYLTWFQRHSEPQAITDEYEQGA
YVYFDWEGSWCQRRKNDFRFEYRWLEDN
NT seq 1707 nt   +upstreamnt  +downstreamnt
atggctgcacgcaagctgcaaagtaggtcgacgatacagctaaccgcgacagccgagatc
gatcggacgttcaaaaaggtggcggagggcgtcgaactcttcgagggcctatacgacaaa
ttacagacctcaccgaatccagggcacaaggagaagttagagtcggacctcaagactcag
atcaagaagctgcagcgcctgcgcgatcagatcaagacatggctccagagcagcgacatc
aaggacaagaagccactgttggaccatcggcggctcattgagacgcaaatggaaaagttc
aaggccgcagaaaaggagatgaagaccaaagccttctccaaagagggcctcatcgccgct
gcgaagctgggcccggaggagaaggcgaagctcgaaatgtccaattggctcacatcgatg
gtcgacgagctgtcgcggcagattgaagccgccgaggcggagatcgagcaaatgatggcc
acgtcgaagaagagcaaaaagtcgacgtccaaagaggaccgcgccggcacgctcgagcac
cagaacgagcgccgacaatggcacatatcccgtctggagatcctgctccggatgctggag
aacggctctctcgaggtcgaccagatcaacgacataaaggaggacatctcttactttgtc
gagagcaatgccgaggaagatttcgaggaggacgagggcatctatgacgaattcaacctg
gacgaggaggaagaagcattcggtctccgggatgccgaggaagagaagatcgagtccccg
ccgacgccgcctcccgcgccggcgcctgaagagcccgtggcgaaggcggctgcgaaggag
acaaagaaggacgaagtgccaccgccaaaagccaaggacgagaaggagaagaaggcgaag
aaggcggccaccacggcctccgggaagctgcagccgacgtcgctgcccgtcccaccaccc
gcgcacaagacccctgcgcctgcagcgacactcccgccgatccgatacgcggccgctgcc
gctgcggcggtggccaccacgccggcggcaggcgcgcccagcccgtccacggcggtgcct
gtgcctgcgtcggagaccgcggccgatacatcggcaacagacgtgcctgtcgaggcggag
ggcgacgtaagtgcggcgagcgccgacgcgagtggtgcggcacctgcgcggagcgatgcg
cggctgcccgacacgctttctgacctggtgacgtcgtttgaatgggcgaaacaaaaggcg
ctcctgcgcgactcgaacctgtcccatgtacagcgctcgctggacgcgagctacgcgggt
ggcgcgccggagcctgtggactcggagagcccgaagcactatgtgccgaaggacccgttc
ccgacgccgagctactacccgcagtcgcctgcgagcctctttgataatccggcgctctac
gccaagtttgacgtggacacactattttacatcttctactaccagcagggcacgtaccac
caatacctggctgcccgtgagttgaagaagcagtcgtggcgcttccacaagcaatacctc
acgtggttccagcggcattcggagccgcaggccatcacggacgagtacgagcagggcgcg
tacgtgtactttgactgggaaggctcgtggtgccagcggcgaaagaacgacttccgcttc
gagtaccgttggctggaggacaactag

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