Malassezia sympodialis: MSY001_1322
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Entry
MSY001_1322 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K06100
symplekin
Organism
msym
Malassezia sympodialis
Pathway
msym03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MSY001_1322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msym03021
]
MSY001_1322
03019 Messenger RNA biogenesis [BR:
msym03019
]
MSY001_1322
Transcription machinery [BR:
msym03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
MSY001_1322
Messenger RNA biogenesis [BR:
msym03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
MSY001_1322
U7-dependent histone pre-mRNA processing factors
MSY001_1322
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
30056207
NCBI-ProteinID:
XP_018739913
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MVLLADPTGAHAKLACECFASVYPRVFLHVSQDLSPMSRHLWQIVCAIKERITFTIDNGA
LGARIGAAKACQRWIQVQSTPDGDPRLQNRAEINLNVIPREHPFLQAPELEAEGDQVFTK
LITLLFTSSAPSLVMAVTQVLTRLARLRTKLNKVVIESFTSWTPQSLDSLAPVHIRSAEN
TIRLAMVHFLQHGSVEPQTTQLTQALERQKQRMDTAAREAYMAQKEGQGRKRDSLKDSDQ
AMAKRARAATPNDPRQPQGMTAADLARLPLNSVVDAIIAGLQSVPEARLKTAIAEFVRAS
APVAPQEPVDPLKMDVGDDDIAPVEPAAPTAEDSTPLKSLEHFELPSPVPLEQREAQALI
VDAVSRICETGSQLVPAQALERASEGHAALWIKLAVRLATRGLDTTVQAVPAPALPELQA
QADKVRGLLLDFVSQDFCERRGIAQQWLAEEWACDRMRQKHGMESSAYHTWLDRILDTQL
STPQVDDVALGSFLRELPEIPLVVLDRLYELCLERSTIGEGFSLLRDVSTARPPLRVPVC
HKVLQLTRHSERLVRGKAIVTARTWVLQRGPLAEPVLDFARESLHLLVEEAKAHDSALAK
APASTEAEEAEETAADPLGLNEQDVLRLIELALVLSVKQPSFFAEVVRIYPLVPAPVQAA
MQKHVTPVARSVGPNSTALLDVLRYYPDGADTLVVAILRILTEKSHTRALAELVQHLCAH
RGLDVEFLLPLVAHLDREAMLEALPKVVSVLSDPTEEHKIEVHHLFQTLIAPAIQATGAQ
GGGEQPTTTATLTPVDLLVLLHVHEKEIGLKPALVAVQICFSMGEVFRSDVLTAVLNRLV
EEEPVPVLFMRTAIMATKSFRTLGSYVSTSLLSRLVQKEIWKEPRLWDGFALCASLTAPT
SFGAMLQLPLPQLEQLIRKQPTLRDPLRDYLIYKAGGPARHGPLLNMLDSIAT
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggtgctacttgctgaccccaccggtgcacatgctaagctcgcgtgtgagtgctttgcc
tcggtgtacccccgtgtgtttcttcacgtgtctcaggacctttcgcccatgagccgccat
ctctggcagattgtgtgtgcgatcaaggagcgcattaccttcactatcgacaatggtgct
ctgggcgcacgtattggcgcggccaaggcatgccagcgctggattcaggtgcaaagcacg
cctgacggtgacccacgcctccaaaaccgtgccgagatcaacttaaatgtgattccacgc
gaacatccgttcctccaggcgcctgaactcgaggctgagggtgaccaagttttcacgaaa
ctgattacgctgctgttcaccagctcggcgcccagcctcgtcatggccgtcacccaagtg
ctcacgcgtctggcacgcttgcgcactaagctcaataaagtggtcatcgagtcatttacg
agctggacaccacaaagtctcgattcgctagcaccagtgcacatccgcagtgccgaaaac
accattcgcctcgccatggtacactttttgcagcatggctcagtggaaccgcaaacgacg
cagttgacgcaggccctcgagaggcagaagcagcgtatggatactgcggctcgcgaggca
tacatggcccagaaagaggggcagggccgcaagcgcgactcgctcaaggactcggatcaa
gcgatggccaagcgcgcgcgtgctgcgacgcctaacgatccgaggcagcctcagggcatg
actgccgcagatctcgcgcgcttgccgctcaacagtgtcgtggacgccatcattgctggg
ctgcaaagcgtgcccgaggcgcggctcaagacggccattgctgagtttgtgcgtgcatcg
gcgccggtcgcgccacaagaacctgtggatccactcaagatggatgtgggtgacgacgat
atcgcgccggttgagccggctgcgcccacagctgaggacagcaccccgctcaagagcttg
gaacactttgagctgccgtcacccgtgccactggagcagcgcgaggcgcaggccttgatt
gtcgatgctgtatcgcgcatttgcgaaacaggcagccagctagtaccagcacaggcgctt
gagcgtgcgtcggaaggccacgcagcgctctggatcaagcttgctgtgcgtctcgcgacg
cgcggtctcgatacgacggtgcaggcggtgccggcaccggcactccctgagctgcaagcg
caggccgacaaagtgcgcggcttgttactggactttgtatcgcaggacttttgcgagcgc
cgcggtattgcacagcagtggctcgccgaggagtgggcctgcgatcgcatgcgccagaag
cacggtatggaaagcagcgcctaccacacttggctggaccgcatcctcgatacacagctg
agcacgccgcaagtggacgatgtggcgcttggctcgttcctgcgcgagctgcctgagatt
ccgcttgtggtgctggatcgcctgtatgagctgtgtctggagcgctccacgattggcgaa
ggcttttccctgctgcgtgacgtcagcacggccaggccgccgctgcgtgtgccggtgtgc
cacaaagtgctgcagctgacacggcacagtgagcggctggtgcgtggcaaggccattgta
accgcccgcacatgggtcctccagcgcggcccgctggccgagcctgtgcttgactttgcg
cgcgagtcgctgcacctcctggtggaggaggcgaaggcccatgactcggccttggccaag
gcgcctgcatcgactgaggcagaagaggcggaggagacagcagcggaccctctgggtctg
aatgagcaggatgtgctgcgtctcattgagcttgcacttgtcttaagtgtgaagcagccg
agtttctttgccgaggtcgtgcgcatatacccacttgtgcctgcgcctgtgcaggcagcc
atgcagaagcacgtcacgccggtggcccgctccgtgggtccgaacagcacagcgcttctg
gacgtgctgcgctactacccagatggcgcggatacgctggtggtcgctattttgcggatt
ctcaccgagaaaagccacacgcgcgccttggcggagctggtgcaacacctgtgtgcacac
cgcgggctcgatgtggagtttttgctgccgctggtggcgcacctcgaccgcgaggctatg
ctcgaggcgctgcccaaggttgtgtcggtgctcagcgacccgacggaggagcacaaaatc
gaggtgcatcacctcttccagacgctcattgcgcctgcgatccaggcgaccggtgcgcag
ggcggtggcgaacaaccgactacgacggcaacgctgacgccagtcgacctgctggtcctg
ctacatgtgcacgagaaagagattgggctcaaacctgcattagtcgcagtgcagatttgc
ttttcgatgggcgaggtgttccgcagcgatgtgctgacggccgtgctaaaccgccttgtg
gaggaggaacctgtgcctgtactgttcatgcgaacggcgatcatggcaaccaagtcgttc
cgtacgctcggctcgtacgtgtcgacatcgctactctcgcgcctcgtgcagaaggaaatt
tggaaggaaccgcggctatgggacggattcgcgctgtgtgcaagtctcacagcgcccaca
tcgtttggcgccatgttgcagcttccgctgccccagctcgaacagctgatccgcaaacaa
cccacgctgcgtgatcctctacgagactatttgatttacaaggcgggtggtccagcacgg
cacggccctcttttgaatatgctcgatagtatcgccacatag
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