KEGG   Malassezia sympodialis: MSY001_1377
Entry
MSY001_1377       CDS       T06541                                 
Name
(RefSeq) uncharacterized protein
  KO
K10756  replication factor C subunit 3/5
Organism
msym  Malassezia sympodialis
Pathway
msym03030  DNA replication
msym03410  Base excision repair
msym03420  Nucleotide excision repair
msym03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:msym00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSY001_1377
   03410 Base excision repair
    MSY001_1377
   03420 Nucleotide excision repair
    MSY001_1377
   03430 Mismatch repair
    MSY001_1377
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msym03032]
    MSY001_1377
   03036 Chromosome and associated proteins [BR:msym03036]
    MSY001_1377
   03400 DNA repair and recombination proteins [BR:msym03400]
    MSY001_1377
DNA replication proteins [BR:msym03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    MSY001_1377
  DNA Replication Termination Factors
   ELG1-RFC complex
    MSY001_1377
Chromosome and associated proteins [BR:msym03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    MSY001_1377
DNA repair and recombination proteins [BR:msym03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     MSY001_1377
  Check point factors
   HRAD17(Rad24)-RFC complex
    MSY001_1377
SSDB
Motif
Pfam: RCF1-5-like_lid DNA_pol3_delta2 RFC_C AAA AAA_assoc_2 AAA_22 Hda_lid
Other DBs
NCBI-GeneID: 30056262
NCBI-ProteinID: XP_018739964
LinkDB
Position
Unknown
AA seq 240 aa
MLYVDKYRPKDLSELHYHSQLTDQLQSLLRVDQRVFLNPSKRKIEVNLISSNYHIEITPS
DAGNYDRLIIQDILKEIAQTQQVDQNAAHRFKVIVINEADMLSRDAQAALRRTMEKYMQN
LRIILCANSTSHIIAPIRSRCLLLRVGAPKDEDMARVLRHVAKREKFHLPDHVADEIVRN
AEGNVRKAILVLETLRVQSQTGRCTELRSATGNKPIFHLEAFVAQVMFMQKSLLLGMDLE
NT seq 723 nt   +upstreamnt  +downstreamnt
atgctgtacgtggacaagtatcggcccaaggacttgagtgagctgcattaccactcgcaa
ctcacagatcagctccagagcttgctccgagtggatcagcgcgtttttttgaatccgagc
aagcgcaagattgaggtcaatcttatcagcagcaactaccatattgaaatcacacccagc
gacgcaggaaattatgaccgcctcatcattcaggatatcctcaaagagattgcacagaca
cagcaagtggaccagaatgcagcgcatcggttcaaggtcattgtcatcaatgaagcggat
atgctctcgcgtgatgcccaggccgcgctccgccgaactatggaaaagtatatgcagaac
ttgcgcatcattctgtgtgcgaacagcacctcgcacatcattgcacctatccggtcgcga
tgcctgctccttcgcgtgggtgcgccgaaggacgaggatatggcgcgcgtgctgcggcac
gttgccaagcgcgaaaagtttcacttgccagaccatgtggccgatgagattgtgcgcaat
gctgagggaaatgtgcgcaaagctattcttgtcctggagacgctgcgcgtccaatcccag
actggcagatgtactgaactgcgaagtgccactggcaacaaacccatcttccatctggag
gcctttgtggcccaagtcatgtttatgcaaaagtctctcctgctagggatggatctggaa
tag

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