Malassezia sympodialis: MSY001_1616
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Entry
MSY001_1616 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
msym
Malassezia sympodialis
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msym03009
]
MSY001_1616
Ribosome biogenesis [BR:
msym03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
MSY001_1616
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
Motif
Other DBs
NCBI-GeneID:
30056501
NCBI-ProteinID:
XP_018740186
UniProt:
M5E8W3
LinkDB
All DBs
Position
Unknown
AA seq
890 aa
AA seq
DB search
MGKHEKKAGKGRLDKFYWLAKEQGYRSRAAFKLVQLNKKYKFLENARCCIDLCAAPGGWL
QVASKHMPPGSLIVGVDLVAIKPIPRCITFAEDINSFKCRDQLRETLKDWRADIVLHDGA
PNVGTAWVQDAYTQSELTLQALKLAVEFLSPGGTFVTKVFRSKDYNNLMWVFNQLFHHVE
ATKPPSSRNVSAEIFVVCQNFRNLSRIDPKFLDPRHVFKELDSDPVQGTSSHNLLENVVN
PEKQRRKREGYEDGNYTLYKAIGADKYIRAMDPIAVLGTYNRITFDTEEDKALLKHAATS
EDVVANCEDLKVLGRRDFSVLIKWRKAVRDSLELDQPKGKDTEDAQTTVEMEPLNEEEAI
DEELSRLNEEAQKRARKERRKRNEARAKALQKLQLNMTTAMDIGEDWRDEALHGEDMFSL
DAIEGRHAPRHARAAELLDANDALEDEDMEGEALNAEEDEHEDEDDRETRLRELESNVDA
MYEQYKDHLERKDAKFRAKEARRNSSKYEEWDGISQKQEDEDEDSDEGPVARGYDAMNKR
KFHEETYDSDDAEDDDDEREELESTANVPPVKSRQTKKAPAESALLTNLEPSGAAAQRQS
AASAVWFDNPIFKDMVPLEDFLPETEAAKDSTPPLEAEDSDEEESSAQEEDVETYGDDIE
LVPSTTNEDIPDGEWDVHDEDVDATKQARIKQHGLHTAEAVSLAHALVNRQLTKTDLVNQ
GFNRHSFNDKAGLPEWFLEDENKHYRTNLPVTKEAVDALRARQRALDARPIKKIAEAKAR
KKHRAALRLEKAQKKAEAINENTDLSEREKAENISKILARSGKKTEKKAPQLVVARGPNR
GIKGRPKGTKGRYKMVDARMKKELRAQKRRDKRDGKKRSSGHKRQIPKGY
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcacgaaaagaaggcgggcaaaggccgtcttgacaagttctactggcttgcc
aaggaacaagggtaccgctcgcgtgctgccttcaagcttgtgcaactgaacaaaaaatac
aagtttcttgagaatgcacgctgctgtatcgatctatgtgctgctccaggtggttggctc
caggtagcaagtaagcatatgcccccaggaagtcttattgtgggtgtagatctcgtcgct
atcaagcccattccccgctgcatcaccttcgccgaagatatcaactcgttcaaatgtcgt
gaccagctccgcgagaccctcaaagattggcgtgccgatattgtactccacgacggtgcc
cctaatgtcggtacagcgtgggtgcaggatgcctacacacaatctgaacttaccttgcag
gccctcaagctcgccgtggagttcctgagtcccggcggcacgtttgtgaccaaggtattc
cgctcgaaggactacaacaacctcatgtgggtattcaatcagctcttccaccacgtcgaa
gcgactaaaccgccgtcctcgcgtaatgtctccgccgagattttcgttgtatgccaaaac
ttccgaaacctctcgcgtatcgatcccaaattcttagatccccgccatgttttcaaggaa
ctcgattcggatcctgtgcagggcacaagctcgcacaatctccttgaaaacgtcgttaac
ccagaaaagcagcgccgcaagcgtgagggatacgaagacggcaactataccctgtataaa
gccattggcgccgacaagtatatacgcgccatggacccgattgccgtactgggtacatac
aaccgcattaccttcgatacagaagaagacaaggcccttctcaagcacgcagctacatcg
gaggacgtggtagccaattgtgaggacctcaaggtacttggccgtcgcgacttttctgtg
ctcatcaagtggcgcaaggccgtgcgtgactcactagagctagaccagcccaagggaaaa
gacacagaagatgcacagacaactgtggaaatggaacccttgaatgaggaggaggccatc
gatgaagagctttcgcgccttaacgaagaggcccagaagcgggctcgtaaggagcgtaga
aaacgtaacgaggctcgtgccaaggccctccagaagcttcagctcaacatgacgacagcc
atggatattggcgaggattggcgtgacgaggctctccatggtgaagatatgttctcactg
gatgctatcgaagggcgacatgctccgcgccatgcacgtgcggcggagctcttggatgca
aatgatgcgctcgaggacgaagacatggagggcgaggcccttaatgctgaagaagacgag
catgaggacgaggacgacagagagactcgtctgcgtgaactcgaatccaacgtggatgct
atgtatgagcaatacaaggaccacttggagcgcaaggatgccaagttccgtgcgaaagag
gcgcgccgcaactcatccaagtacgaagaatgggacggcatttcgcagaagcaggaggat
gaggacgaagacagcgacgaagggcctgtcgcgcgtggatacgacgcaatgaacaaacgc
aaatttcatgaagagacatacgactccgatgacgccgaggacgacgatgacgagcgtgaa
gagttggagtctaccgcaaacgtcccgccggtcaagtcacgacaaaccaagaaggctccc
gcggagtcggcccttcttacgaacctggagccatccggagcagctgcccaacgccagagc
gcagcctcggcggtgtggttcgacaatccaatctttaaggatatggtgcctcttgaggac
tttcttcctgagacggaggctgcgaaggattcgactcctccactcgaagcggaggacagt
gacgaggaagagagctctgcccaggaggaagatgtcgagacttacggtgacgacattgag
cttgtgccttcgaccacgaatgaagacattccagacggtgaatgggacgtgcacgatgaa
gatgttgacgctaccaagcaagcgcgcatcaagcaacatggtctgcacacagccgaagct
gtctctctggcccatgcgcttgtgaaccgccagctgaccaagacagacctagtgaaccaa
gggtttaatcgtcacagcttcaatgacaaagcgggtctacctgaatggttcttggaggac
gaaaacaagcactaccggaccaacctccctgtgaccaaggaggctgtcgatgctctgcgt
gcacgccagcgcgcgcttgatgctcgtcctataaagaagatcgctgaagccaaggctcgc
aagaagcatcgtgctgccctacgccttgaaaaagcgcaaaagaaggctgaggcgatcaac
gagaacaccgacctgtcggagagggagaaggccgagaatatcagcaagatcttggctcga
agtggcaagaaaactgaaaagaaggcaccccagctcgttgttgcccgtggccccaaccgc
ggtatcaagggtcgtccgaagggcactaaaggtcgctataagatggtggatgcacgtatg
aagaaagagctccgcgcgcaaaagcgccgtgacaagcgggatggcaagaaacgcagctca
gggcataaacgccagatccctaagggctactaa
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