Malassezia sympodialis: MSY001_1636
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Entry
MSY001_1636 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K12830
splicing factor 3B subunit 3
Organism
msym
Malassezia sympodialis
Pathway
msym03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MSY001_1636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msym03021
]
MSY001_1636
03041 Spliceosome [BR:
msym03041
]
MSY001_1636
03036 Chromosome and associated proteins [BR:
msym03036
]
MSY001_1636
Transcription machinery [BR:
msym03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
MSY001_1636
Spliceosome [BR:
msym03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
MSY001_1636
Complex B
MSY001_1636
Complex C
U2 SnRNP specific factors
MSY001_1636
Chromosome and associated proteins [BR:
msym03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
MSY001_1636
TFTC complex
MSY001_1636
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_EML_2
Beta-prop_BBS7
WD40_WDHD1_1st
wHTH-HSP90_Na-assoc
Motif
Other DBs
NCBI-GeneID:
30056521
NCBI-ProteinID:
XP_018740205
UniProt:
M5E8K2
LinkDB
All DBs
Position
Unknown
AA seq
1207 aa
AA seq
DB search
MQLYNFTVQPTSSVTAAVVGQFLGTRQQHVLLVRGSRLELYDVDTEQGQMSQVMTQNLFG
NLRSATCFRLTGSTKDHLIVGSDSGRIAVLEYQEELNRFVKVHLETFGRSGNRRIVPGQY
LATDPKGRAVMIGAVEKSKLIYILNRDAQAHLTISSPLEAHRATAIVECIVGVDVGYENP
LFASLEMDYAEADADVTGAAAAHTEKMLTYYELDLGLNHVVRRWSEPVDRSAHHLVSVPG
GYNHSTQRWDGPSGVLVCMDDFVVYKHQGQPEHCVPIPVRYNPAAQQRRGSMVVASVLHK
MKAAFFILLQTEDGDLFKVTIDHDEEEVQALRIQYFDTVPVAVNLAILRAGFLYVASETG
TQQLYSFQKLGDDEGLECVSTSYPDRGIHRRMSLPSFVPRGLENLALAWELEALDPLMDA
KMANPLHDDVPQIYTACGRGARSSFKRLRHGLEVSEVVSSELPGVPQAVWSTKLRRSDEY
DGYIVLSFVNGTLVLSIGETIEEVVDSGLLTSAPTLAIQQLGADALLQVHPRGIRHILPN
QQINEWTTPLLETGASTQIVAATTNERQVVIALDNHEIVYFELDMDGQLNEYQERRDMGA
DVVAISIAACPEGSQRTPYVAIGCADQTIRIVSLDPDSTLSQVSLQALTAPPSSICISEM
LDTSLDRHHLTMFVGIGLTNGVYIRTVLDPTTGQLTDTRTRFLGSRPVTLVRVQVHGDTA
VLALSSRSWLSYTLHGHTHFTPLMFDTLAYVSSFSTELCPDGLLGITGDALRIITVPHLG
GELKMDSMSVSYTPRKLAVHPDDASLFYMVEADHRVLSPIAPERIRAPSPRGVLDLEPAT
FGLVRAEAGRWASCVRIVDAKTMNTLWQLELEQDEAAFSVALVRFTSASNELFVIVGSAV
GVTQAPQRHRGAYLTTYRLVQDGRALDMVHKTEVDGVPLALHAFHGRLLAGTGAYVRIFD
MGTKKLLRKCQSRPFPAQVVSLNVQGARVIVGDMQESVHYVMYKEAINSLIPFADDTLPR
YTTCSIMLDYDTVMAGDKFGNVYVLRIDSGASMAADEDPTGLMLQNDRSYLMGAGHRSQL
LAHFHLGDIVTSLSLESLVPGGRPVVIYTCVAGTVGALVPFISREDVKLMSTLEMYMRQE
DLSLVGRDHLAYRGHYAPVKAVVDGDLCESFLSLPHEKQAHIAEELDRSPGEIAKKLAQL
RETTTGF
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgtacaatttcaccgtgcagccgacgtccagtgtgaccgcggctgtagtggga
cagttccttggaacgcgccaacagcatgtcctgctcgtgcgtggctcgcgcttggagtta
tatgacgtcgacacggagcaagggcagatgtcgcaagtgatgacgcaaaatttgttcggc
aacctccgcagcgctacttgcttccgccttaccggaagcaccaaagatcatctcattgtt
ggcagcgactcagggcgcattgccgtgctggagtaccaagaggagctgaaccggtttgtc
aaggtgcacctggaaacgtttgggcgctctgggaaccggcgcattgtgccggggcagtat
cttgccacggaccccaagggccgtgcagtgatgataggcgctgtcgaaaagtccaagctg
atctatatcctcaatcgggacgcccaggcccatctcactatctcgagcccactggaagcg
catcgtgcgacggccattgtcgagtgcattgttggtgtggatgttggctacgagaatccg
ctctttgcgtcgctggagatggattatgccgaggcggacgccgatgtcacaggggccgcg
gccgctcatacggagaaaatgctcacgtactatgagttggacctgggactgaaccacgtc
gtgcgccgctggtcggagcccgtggaccgcagtgcgcaccatcttgtgagtgtccctggt
ggatataaccattcgacgcagcgctgggatggcccgagtggtgtgcttgtgtgcatggat
gatttcgtcgtgtacaagcaccagggacaaccggagcactgtgtcccgatacctgtccgt
tacaaccccgcagctcagcagcggcgtgggtctatggtggtcgccagtgtgctgcacaag
atgaaggctgccttcttcattctgttgcaaaccgaggacggcgatctgtttaaggttaca
atcgaccatgacgaagaggaagtgcaggccttgcgcatccagtactttgatacggtgcct
gttgccgtcaacctcgccattcttcgtgcaggcttcctgtacgtggcctccgagacaggc
acccagcagctttactcgttccagaaattgggcgatgacgaaggactcgagtgcgtatcg
acgtcgtaccccgaccggggcattcatcgacgcatgtcacttccttcgtttgtgccgcgt
ggactggaaaacctcgcgctggcctgggagctggaggcactcgatccgctgatggacgcc
aagatggcgaatccgctgcatgacgacgtgccgcagatctatacagcatgtgggcggggc
gcgcgcagttcgttcaagcgcttgcgtcatggtttggaagtcagtgaagtcgtcagcagc
gaacttccgggcgtcccacaggctgtgtggtcgaccaagttgcgccgatcggatgagtac
gacgggtacattgtgttgagctttgtcaatggcacccttgtgctcagcattggagagaca
attgaggaagttgtcgacagtggacttttgacgtcggcgcccacgttggcgatccagcag
cttggcgctgatgccctactacaggtacacccacggggtatccggcacattctgccgaac
cagcagatcaacgaatggacgacaccgctgttggagaccggtgcatcgacgcagattgtc
gccgccacgactaacgagcgacaggtggtgattgccctggacaaccacgagattgtgtat
tttgagctcgacatggacggtcagctcaatgagtaccaagagcgacgcgatatgggcgcc
gacgttgtggccatcagtatcgctgcatgcccagaaggcagtcagcgcacgccgtatgtg
gctattggctgcgccgaccagaccatccgtatcgtatcactggaccctgattcgacgctg
tcgcaagtcagtttacaggccctgactgcgccgccatcgagcatttgcatcagtgagatg
cttgatacatcgctggaccgccatcacctcaccatgtttgtgggtatcggcttgacgaac
ggtgtttatatccgaacggtactggatccgacgacggggcagctcaccgacacacgcaca
cggttccttggcagccggcctgtgacgctggtgcgggtacaggtccacggcgacacggct
gtgcttgcactgagcagccgcagctggcttagctacaccctgcacggtcacacgcacttc
acgccgctcatgttcgacacgctcgcctacgtgtctagctttagcacggagctctgcccc
gatggcttactgggtatcacaggcgatgcactgcggatcatcacggtgccgcatctcggc
ggtgagctcaagatggactcgatgtctgtctcgtatacgccacggaaattggcagtccac
cctgacgatgcgagtctgttctatatggtcgaagcagaccaccgcgtactctcgcccatc
gctcctgagcgcatccgcgccccatcgcctcggggcgtgctagaccttgagcctgctacc
ttcggactcgtacgtgctgaggcaggacgctgggccagctgtgtgcgtatcgtcgatgcc
aagacgatgaatacactgtggcagttggagctcgagcaggacgaggcagcatttagcgtg
gctctcgtgcgctttactagcgcgtccaacgagctctttgtgattgtgggctcggccgtg
ggcgtgacacaggcgccccagcgccatcgtggggcatatctaacgacgtaccgactcgtc
caggacgggcgggcgctggacatggtgcataagacggaggtggacggcgtgccccttgct
ctccatgcatttcatgggcgtcttctcgctggcaccggtgcgtatgtgcgcatctttgat
atggggacgaagaaactcttgcgcaagtgccagagcagaccgtttccggctcaggtcgtg
tcgctgaacgtgcagggcgcgcgtgtcattgttggagatatgcaggaatctgtgcactat
gtcatgtacaaggaggccatcaacagtctgattcctttcgcggacgataccctgccacgc
tacacgacctgctcgattatgctcgactacgatacggtgatggccggcgacaagtttggc
aatgtgtatgtgctgcgcattgactcgggggcatcgatggccgcggatgaagaccccacg
ggtctcatgctgcaaaatgaccgctcatacctgatgggggcaggtcatcgctcacagctt
ctcgcgcatttccacctgggcgacattgtgaccagcctctcgctggaaagcctggtacca
gggggtcgtcccgtcgtgatatacacgtgcgtggccgggactgtcggtgctctcgttcct
ttcattagtcgcgaggacgtcaagctgatgtcaacgctggagatgtatatgcgccaagag
gacctgagtcttgtcgggcgtgaccacctcgcttaccgaggtcactatgcgccggtgaag
gcggttgtggacggcgatttgtgcgagtctttcctttctttgccacatgagaagcaggcc
cacattgccgaggagctcgatcggtcacctggtgagattgccaaaaagcttgcacagctg
cgcgagaccaccaccgggttttag
DBGET
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