KEGG   Malassezia sympodialis: MSY001_1636
Entry
MSY001_1636       CDS       T06541                                 
Name
(RefSeq) uncharacterized protein
  KO
K12830  splicing factor 3B subunit 3
Organism
msym  Malassezia sympodialis
Pathway
msym03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msym00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MSY001_1636
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msym03021]
    MSY001_1636
   03041 Spliceosome [BR:msym03041]
    MSY001_1636
   03036 Chromosome and associated proteins [BR:msym03036]
    MSY001_1636
Transcription machinery [BR:msym03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     MSY001_1636
Spliceosome [BR:msym03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    MSY001_1636
 Complex B
    MSY001_1636
 Complex C
   U2 SnRNP specific factors
    MSY001_1636
Chromosome and associated proteins [BR:msym03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     MSY001_1636
    TFTC complex
     MSY001_1636
SSDB
Motif
Pfam: Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_EML_2 Beta-prop_BBS7 WD40_WDHD1_1st wHTH-HSP90_Na-assoc
Other DBs
NCBI-GeneID: 30056521
NCBI-ProteinID: XP_018740205
UniProt: M5E8K2
LinkDB
Position
Unknown
AA seq 1207 aa
MQLYNFTVQPTSSVTAAVVGQFLGTRQQHVLLVRGSRLELYDVDTEQGQMSQVMTQNLFG
NLRSATCFRLTGSTKDHLIVGSDSGRIAVLEYQEELNRFVKVHLETFGRSGNRRIVPGQY
LATDPKGRAVMIGAVEKSKLIYILNRDAQAHLTISSPLEAHRATAIVECIVGVDVGYENP
LFASLEMDYAEADADVTGAAAAHTEKMLTYYELDLGLNHVVRRWSEPVDRSAHHLVSVPG
GYNHSTQRWDGPSGVLVCMDDFVVYKHQGQPEHCVPIPVRYNPAAQQRRGSMVVASVLHK
MKAAFFILLQTEDGDLFKVTIDHDEEEVQALRIQYFDTVPVAVNLAILRAGFLYVASETG
TQQLYSFQKLGDDEGLECVSTSYPDRGIHRRMSLPSFVPRGLENLALAWELEALDPLMDA
KMANPLHDDVPQIYTACGRGARSSFKRLRHGLEVSEVVSSELPGVPQAVWSTKLRRSDEY
DGYIVLSFVNGTLVLSIGETIEEVVDSGLLTSAPTLAIQQLGADALLQVHPRGIRHILPN
QQINEWTTPLLETGASTQIVAATTNERQVVIALDNHEIVYFELDMDGQLNEYQERRDMGA
DVVAISIAACPEGSQRTPYVAIGCADQTIRIVSLDPDSTLSQVSLQALTAPPSSICISEM
LDTSLDRHHLTMFVGIGLTNGVYIRTVLDPTTGQLTDTRTRFLGSRPVTLVRVQVHGDTA
VLALSSRSWLSYTLHGHTHFTPLMFDTLAYVSSFSTELCPDGLLGITGDALRIITVPHLG
GELKMDSMSVSYTPRKLAVHPDDASLFYMVEADHRVLSPIAPERIRAPSPRGVLDLEPAT
FGLVRAEAGRWASCVRIVDAKTMNTLWQLELEQDEAAFSVALVRFTSASNELFVIVGSAV
GVTQAPQRHRGAYLTTYRLVQDGRALDMVHKTEVDGVPLALHAFHGRLLAGTGAYVRIFD
MGTKKLLRKCQSRPFPAQVVSLNVQGARVIVGDMQESVHYVMYKEAINSLIPFADDTLPR
YTTCSIMLDYDTVMAGDKFGNVYVLRIDSGASMAADEDPTGLMLQNDRSYLMGAGHRSQL
LAHFHLGDIVTSLSLESLVPGGRPVVIYTCVAGTVGALVPFISREDVKLMSTLEMYMRQE
DLSLVGRDHLAYRGHYAPVKAVVDGDLCESFLSLPHEKQAHIAEELDRSPGEIAKKLAQL
RETTTGF
NT seq 3624 nt   +upstreamnt  +downstreamnt
atgcagctgtacaatttcaccgtgcagccgacgtccagtgtgaccgcggctgtagtggga
cagttccttggaacgcgccaacagcatgtcctgctcgtgcgtggctcgcgcttggagtta
tatgacgtcgacacggagcaagggcagatgtcgcaagtgatgacgcaaaatttgttcggc
aacctccgcagcgctacttgcttccgccttaccggaagcaccaaagatcatctcattgtt
ggcagcgactcagggcgcattgccgtgctggagtaccaagaggagctgaaccggtttgtc
aaggtgcacctggaaacgtttgggcgctctgggaaccggcgcattgtgccggggcagtat
cttgccacggaccccaagggccgtgcagtgatgataggcgctgtcgaaaagtccaagctg
atctatatcctcaatcgggacgcccaggcccatctcactatctcgagcccactggaagcg
catcgtgcgacggccattgtcgagtgcattgttggtgtggatgttggctacgagaatccg
ctctttgcgtcgctggagatggattatgccgaggcggacgccgatgtcacaggggccgcg
gccgctcatacggagaaaatgctcacgtactatgagttggacctgggactgaaccacgtc
gtgcgccgctggtcggagcccgtggaccgcagtgcgcaccatcttgtgagtgtccctggt
ggatataaccattcgacgcagcgctgggatggcccgagtggtgtgcttgtgtgcatggat
gatttcgtcgtgtacaagcaccagggacaaccggagcactgtgtcccgatacctgtccgt
tacaaccccgcagctcagcagcggcgtgggtctatggtggtcgccagtgtgctgcacaag
atgaaggctgccttcttcattctgttgcaaaccgaggacggcgatctgtttaaggttaca
atcgaccatgacgaagaggaagtgcaggccttgcgcatccagtactttgatacggtgcct
gttgccgtcaacctcgccattcttcgtgcaggcttcctgtacgtggcctccgagacaggc
acccagcagctttactcgttccagaaattgggcgatgacgaaggactcgagtgcgtatcg
acgtcgtaccccgaccggggcattcatcgacgcatgtcacttccttcgtttgtgccgcgt
ggactggaaaacctcgcgctggcctgggagctggaggcactcgatccgctgatggacgcc
aagatggcgaatccgctgcatgacgacgtgccgcagatctatacagcatgtgggcggggc
gcgcgcagttcgttcaagcgcttgcgtcatggtttggaagtcagtgaagtcgtcagcagc
gaacttccgggcgtcccacaggctgtgtggtcgaccaagttgcgccgatcggatgagtac
gacgggtacattgtgttgagctttgtcaatggcacccttgtgctcagcattggagagaca
attgaggaagttgtcgacagtggacttttgacgtcggcgcccacgttggcgatccagcag
cttggcgctgatgccctactacaggtacacccacggggtatccggcacattctgccgaac
cagcagatcaacgaatggacgacaccgctgttggagaccggtgcatcgacgcagattgtc
gccgccacgactaacgagcgacaggtggtgattgccctggacaaccacgagattgtgtat
tttgagctcgacatggacggtcagctcaatgagtaccaagagcgacgcgatatgggcgcc
gacgttgtggccatcagtatcgctgcatgcccagaaggcagtcagcgcacgccgtatgtg
gctattggctgcgccgaccagaccatccgtatcgtatcactggaccctgattcgacgctg
tcgcaagtcagtttacaggccctgactgcgccgccatcgagcatttgcatcagtgagatg
cttgatacatcgctggaccgccatcacctcaccatgtttgtgggtatcggcttgacgaac
ggtgtttatatccgaacggtactggatccgacgacggggcagctcaccgacacacgcaca
cggttccttggcagccggcctgtgacgctggtgcgggtacaggtccacggcgacacggct
gtgcttgcactgagcagccgcagctggcttagctacaccctgcacggtcacacgcacttc
acgccgctcatgttcgacacgctcgcctacgtgtctagctttagcacggagctctgcccc
gatggcttactgggtatcacaggcgatgcactgcggatcatcacggtgccgcatctcggc
ggtgagctcaagatggactcgatgtctgtctcgtatacgccacggaaattggcagtccac
cctgacgatgcgagtctgttctatatggtcgaagcagaccaccgcgtactctcgcccatc
gctcctgagcgcatccgcgccccatcgcctcggggcgtgctagaccttgagcctgctacc
ttcggactcgtacgtgctgaggcaggacgctgggccagctgtgtgcgtatcgtcgatgcc
aagacgatgaatacactgtggcagttggagctcgagcaggacgaggcagcatttagcgtg
gctctcgtgcgctttactagcgcgtccaacgagctctttgtgattgtgggctcggccgtg
ggcgtgacacaggcgccccagcgccatcgtggggcatatctaacgacgtaccgactcgtc
caggacgggcgggcgctggacatggtgcataagacggaggtggacggcgtgccccttgct
ctccatgcatttcatgggcgtcttctcgctggcaccggtgcgtatgtgcgcatctttgat
atggggacgaagaaactcttgcgcaagtgccagagcagaccgtttccggctcaggtcgtg
tcgctgaacgtgcagggcgcgcgtgtcattgttggagatatgcaggaatctgtgcactat
gtcatgtacaaggaggccatcaacagtctgattcctttcgcggacgataccctgccacgc
tacacgacctgctcgattatgctcgactacgatacggtgatggccggcgacaagtttggc
aatgtgtatgtgctgcgcattgactcgggggcatcgatggccgcggatgaagaccccacg
ggtctcatgctgcaaaatgaccgctcatacctgatgggggcaggtcatcgctcacagctt
ctcgcgcatttccacctgggcgacattgtgaccagcctctcgctggaaagcctggtacca
gggggtcgtcccgtcgtgatatacacgtgcgtggccgggactgtcggtgctctcgttcct
ttcattagtcgcgaggacgtcaagctgatgtcaacgctggagatgtatatgcgccaagag
gacctgagtcttgtcgggcgtgaccacctcgcttaccgaggtcactatgcgccggtgaag
gcggttgtggacggcgatttgtgcgagtctttcctttctttgccacatgagaagcaggcc
cacattgccgaggagctcgatcggtcacctggtgagattgccaaaaagcttgcacagctg
cgcgagaccaccaccgggttttag

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