Malassezia sympodialis: MSY001_1903
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Entry
MSY001_1903 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K10752
histone-binding protein RBBP4
Organism
msym
Malassezia sympodialis
Pathway
msym03082
ATP-dependent chromatin remodeling
msym03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
MSY001_1903
03083 Polycomb repressive complex
MSY001_1903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msym03036
]
MSY001_1903
Chromosome and associated proteins [BR:
msym03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
MSY001_1903
Histone modification proteins
HAT complexes
HATB complex
MSY001_1903
HDAC complexes
Sin3A-HDAC complex
MSY001_1903
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
MSY001_1903
PRC2.2
MSY001_1903
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
MSY001_1903
Heterochromatin formation proteins
Other heterochromatin formation proteins
MSY001_1903
Chromatin remodeling factors
NuRD complex
MSY001_1903
NuRF complex
MSY001_1903
NuRF complex (fruit fly)
MSY001_1903
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EML
WD_LRWD1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_RIG_1st
WDR90_beta-prop_4th
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
MIOS_WD40
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
30056788
NCBI-ProteinID:
XP_018740459
UniProt:
M5E984
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MSNVEIAEDEASANMAIISNEEYKIWKKNSPFLYDMVITHALEWPTLTMQWMPDKEVFAD
KGFTRHRFLLGTHTSGQDNNYLQIATVNLPNTEGEGLEAKLDIKDYDEEKGEIGSYSSAS
TRVQVTQRINHEGEVNRARYCPQNCDLIATRAVSGLSYVFDRTKHSNQPDSDGKCRPDIV
LRGQTREGYGLSWNPIRQGHILCASEDTTVCHWDINAYQKETKTLDPVRTYRGHSAIVED
VAWHNHHEHLFASVGDDRQMLLWDTRDSGEAPKYRVEAHQGEVNAVAFSPASEYIIATAS
SDKTVGLWDLRNLSVHLHSLEAHKDEVLQLAWSPHHETVLCSASADRRVNVWDLSRIGEE
QTAEDAEDGPAELLFVHGGHTSRPTDLTWSPQDPWKVATAAEDNIVMVWQPARSIVEPVE
VEPDAAELE
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgtggagatcgccgaagacgaggcctcggccaatatggccattatctcgaat
gaggagtacaaaatatggaagaaaaactcgccgttcctgtatgacatggtgatcacgcat
gctctcgaatggcccaccctcacaatgcaatggatgcctgacaaggaggtatttgctgat
aagggatttacgcggcatcgtttcctcctaggcacacacacctctggtcaggacaacaac
tacctgcagattgctaccgtgaatctgcccaacaccgagggcgagggccttgaggcaaag
ctggatataaaggactacgatgaagaaaaaggagaaattggctcgtactcgtcggcatcg
acgcgtgtccaggtgacacagcgcatcaaccacgagggcgaagtcaatcgcgcgcggtat
tgccctcagaactgtgacctgattgctactcgtgctgtcagtggcctttcatatgtgttt
gatcgtaccaagcacagcaaccagccggacagcgatggcaagtgccgtccggatatcgtg
ctacgaggacagactcgggagggctatggtctctcctggaaccctattcgccagggccac
attttgtgtgcgtccgaagatacgactgtgtgccattgggacatcaacgcataccaaaaa
gagactaaaaccctcgatccagtccggacgtatcgtggtcattcggctatcgtggaagat
gttgcctggcacaaccaccatgagcacctatttgcgtctgttggtgacgaccgccagatg
ctgctctgggacacgcgtgattcgggtgaggcgccgaagtaccgcgtcgaggcacaccag
ggtgaggtcaacgccgtggccttcagtccagcgagtgaatatatcattgcgacagcctcc
agcgacaagacagttggcctatgggatctgcgtaatctgagtgtgcacttgcattcactc
gaggcccataaagatgaagtgctgcagctggcatggtcgccgcatcacgagacggttctt
tgctccgcctccgctgaccgccgagtcaatgtgtgggacctgagccgtattggcgaagag
cagacggccgaagatgctgaggacggcccggccgaattgctgtttgtgcacggcggtcac
actagcaggccgacggacctgacatggagtcctcaggacccctggaaggtggcgacagct
gctgaagacaacattgtcatggtatggcagccggctcgctcgattgttgagcctgtcgag
gtcgagccggatgccgccgaactggagtag
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