KEGG   Malassezia sympodialis: MSY001_1903
Entry
MSY001_1903       CDS       T06541                                 
Name
(RefSeq) uncharacterized protein
  KO
K10752  histone-binding protein RBBP4
Organism
msym  Malassezia sympodialis
Pathway
msym03082  ATP-dependent chromatin remodeling
msym03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:msym00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    MSY001_1903
   03083 Polycomb repressive complex
    MSY001_1903
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:msym03036]
    MSY001_1903
Chromosome and associated proteins [BR:msym03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     MSY001_1903
  Histone modification proteins
   HAT complexes
    HATB complex
     MSY001_1903
   HDAC complexes
    Sin3A-HDAC complex
     MSY001_1903
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     MSY001_1903
    PRC2.2
     MSY001_1903
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     MSY001_1903
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    MSY001_1903
  Chromatin remodeling factors
   NuRD complex
    MSY001_1903
   NuRF complex
    MSY001_1903
   NuRF complex (fruit fly)
    MSY001_1903
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_EIPR1 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd WD40_WDHD1_1st WDR55 Beta-prop_EML WD_LRWD1 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd EIF3I Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_WDR19_1st ANAPC4_WD40 Beta-prop_RIG_1st WDR90_beta-prop_4th Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N MIOS_WD40 Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 30056788
NCBI-ProteinID: XP_018740459
UniProt: M5E984
LinkDB
Position
Unknown
AA seq 429 aa
MSNVEIAEDEASANMAIISNEEYKIWKKNSPFLYDMVITHALEWPTLTMQWMPDKEVFAD
KGFTRHRFLLGTHTSGQDNNYLQIATVNLPNTEGEGLEAKLDIKDYDEEKGEIGSYSSAS
TRVQVTQRINHEGEVNRARYCPQNCDLIATRAVSGLSYVFDRTKHSNQPDSDGKCRPDIV
LRGQTREGYGLSWNPIRQGHILCASEDTTVCHWDINAYQKETKTLDPVRTYRGHSAIVED
VAWHNHHEHLFASVGDDRQMLLWDTRDSGEAPKYRVEAHQGEVNAVAFSPASEYIIATAS
SDKTVGLWDLRNLSVHLHSLEAHKDEVLQLAWSPHHETVLCSASADRRVNVWDLSRIGEE
QTAEDAEDGPAELLFVHGGHTSRPTDLTWSPQDPWKVATAAEDNIVMVWQPARSIVEPVE
VEPDAAELE
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgtcgaacgtggagatcgccgaagacgaggcctcggccaatatggccattatctcgaat
gaggagtacaaaatatggaagaaaaactcgccgttcctgtatgacatggtgatcacgcat
gctctcgaatggcccaccctcacaatgcaatggatgcctgacaaggaggtatttgctgat
aagggatttacgcggcatcgtttcctcctaggcacacacacctctggtcaggacaacaac
tacctgcagattgctaccgtgaatctgcccaacaccgagggcgagggccttgaggcaaag
ctggatataaaggactacgatgaagaaaaaggagaaattggctcgtactcgtcggcatcg
acgcgtgtccaggtgacacagcgcatcaaccacgagggcgaagtcaatcgcgcgcggtat
tgccctcagaactgtgacctgattgctactcgtgctgtcagtggcctttcatatgtgttt
gatcgtaccaagcacagcaaccagccggacagcgatggcaagtgccgtccggatatcgtg
ctacgaggacagactcgggagggctatggtctctcctggaaccctattcgccagggccac
attttgtgtgcgtccgaagatacgactgtgtgccattgggacatcaacgcataccaaaaa
gagactaaaaccctcgatccagtccggacgtatcgtggtcattcggctatcgtggaagat
gttgcctggcacaaccaccatgagcacctatttgcgtctgttggtgacgaccgccagatg
ctgctctgggacacgcgtgattcgggtgaggcgccgaagtaccgcgtcgaggcacaccag
ggtgaggtcaacgccgtggccttcagtccagcgagtgaatatatcattgcgacagcctcc
agcgacaagacagttggcctatgggatctgcgtaatctgagtgtgcacttgcattcactc
gaggcccataaagatgaagtgctgcagctggcatggtcgccgcatcacgagacggttctt
tgctccgcctccgctgaccgccgagtcaatgtgtgggacctgagccgtattggcgaagag
cagacggccgaagatgctgaggacggcccggccgaattgctgtttgtgcacggcggtcac
actagcaggccgacggacctgacatggagtcctcaggacccctggaaggtggcgacagct
gctgaagacaacattgtcatggtatggcagccggctcgctcgattgttgagcctgtcgag
gtcgagccggatgccgccgaactggagtag

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