Malassezia sympodialis: MSY001_1910
Help
Entry
MSY001_1910 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
msym
Malassezia sympodialis
Pathway
msym03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MSY001_1910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msym03019
]
MSY001_1910
Messenger RNA biogenesis [BR:
msym03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
MSY001_1910
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
30056795
NCBI-ProteinID:
XP_018740466
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MSGAGDPIDDEDAFLYGTSNTEITPSHDAALSVEPSSESLARPADTGLETARPDSSAAAG
IEEDIEFIIDPNAPLVPPSRTMSFAPPAPAFKQNIISTESPVITNDHVEPPAAPSQLTAI
PPVEPTDVEVGPTASTVKQARAMEEPLGPEGPPPSASSTGPELQLDPSEAALRYPPTDSL
YDGRTQEEQAQEPPPMTIYQVDIESLPEKPWRRPGANLSDWFNYGFDEHTWALWCAKKNM
MSDARADLGAADEAQVPGMPAMPFMPPMEGSQDAFAAMFGPGAMMSMPSMPTWPGMQDDG
QSNAMAIPPVMPAMPGAPWGEVPPPASEIGSCAPQDGQHDARPSGTDMQEPRHERRGRRG
GRRHGRSGGSGARRAEHEDDNARSQGPYNDRDTAHGAGDTLDYGVRPEESQWHRGSPRRT
DHDGDDDAYDPEHFGRPPPQQHGHRDRPSRRERERARHERRSGRGGQKRGPPEGADDGGD
YASKRFHGGRGP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcgccggcgatcccatcgacgatgaagacgcgttcctttatggcacatcgaat
actgagattacaccgtcacatgatgctgctctctcagtagaaccctcgtccgaatcactg
gctcgtcctgccgacacaggcctcgagacggcgcggccagactcgtcggctgccgcgggt
atcgaggaagacattgagtttattattgacccaaatgcaccactggtacctccttcgcgg
acaatgtcgttcgccccgccggcgcctgcattcaagcagaatatcatttcgacagaatcc
cctgtaatcacaaacgaccatgtcgagcctcccgctgcgccgtctcagctgacagcaata
ccccctgtcgagccaacggacgtggaagtcggacctacagcttctacggtcaagcaagca
agggccatggaggagccactcgggccggaaggcccccctccgtctgcatcatcgacgggt
cctgagctccagcttgatccctcggaggcggcactgcgttatcccccgacggacagcctc
tacgatggacgcacacaagaggagcaagcgcaggagcctccgcccatgactatataccaa
gtggacattgagtctctacctgaaaagccctggcgtcgtccaggtgccaacttgagtgat
tggtttaattatgggtttgacgagcacacttgggccttgtggtgtgccaaaaagaatatg
atgagtgacgcacgagcagatttgggagcagcggacgaagcacaggtgccaggcatgccc
gctatgccttttatgcctcccatggagggttctcaagatgcctttgccgccatgtttggc
cccggggctatgatgagcatgccctctatgccgacatggccaggtatgcaggacgacggg
cagtccaatgccatggctattccaccagtcatgccagcgatgccgggtgccccatggggt
gaggtcccacctcctgcgtccgagatcggatcatgcgcgccgcaggacggccagcatgat
gcgcgccccagtggtacagacatgcaagagcctcgccacgaacgccggggccgccgcgga
ggacggcggcatgggcgctcgggcgggagcggcgcgcgccgtgctgagcacgaagatgac
aatgcccgttctcaagggccctacaatgaccgcgacacggcgcatggtgcaggtgatact
ctcgactatggtgtacgcccagaggaatctcaatggcaccgcggctcgccgcggcgaact
gaccatgatggtgacgatgacgcgtacgatccggagcattttggtcgaccgccgccccag
caacatggccatcgtgaccgtccaagtcgacgagagcgcgagcgtgcaaggcacgagcgc
cgctctggtcgtggcgggcagaagcgagggccaccggagggtgcagatgatggaggcgac
tacgcctcgaagcggttccacggaggtcgcgggccatag
DBGET
integrated database retrieval system
