Malassezia sympodialis: MSY001_2001
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Entry
MSY001_2001 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
msym
Malassezia sympodialis
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msym01009
]
MSY001_2001
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msym03009
]
MSY001_2001
Enzymes [BR:
msym01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MSY001_2001
Protein phosphatases and associated proteins [BR:
msym01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
MSY001_2001
Ribosome biogenesis [BR:
msym03009
]
Eukaryotic type
Pre-60S particles
Helicases
MSY001_2001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
CTE_SPB4
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
30056886
NCBI-ProteinID:
XP_018740551
LinkDB
All DBs
Position
Unknown
AA seq
741 aa
AA seq
DB search
MDDDGLLLHFDTTAPAPKAQRRDAKRGPKPTAPKRAKPAPAAARAHATADQRMLARAREM
AGGEGARPRTQGPGGYISSLFARDEQNAAEPEAVPAARGAAPTNAPSGDATFEQLGLDPI
IATHLRERMDVHGRPTEIQRLAIPPLLAAPPSALAMRDVLIQAQTGSGKTLTYLLPILQT
LLPLSEESFMDRSVGTLAIVLAPTRELARQIYQVLERLLTLSLASTDEDGAPKRRARWIV
PGLLTGGSTKNHEKQRLRKGCPILVSTPGRLLDHLQNTSSLDVGKCRWLVLDEADRLLEM
GFEAQLTGILQALDGRRRLSVRAAREALAESGALPPGATDAEITDSLGIAWWAWRRRLVL
CSATLDEHVQAFAGTALHDPLLVRAGAAPAAAPAASGGPAPSTFSAPAQLEQHAVLVPPK
LRLVVLLALLRRSLPRGGTDGAPVRVMVFLTCTDAVDFHWHALGGVRMGRSDESAPDKAP
DDALALRSELLPGVFLYRLHGSMAQKERIASLQAFHRLTDGTDAARATRGGVMLCTSVAS
RGLDLPDVGCVIQMDVPTEGGVEEYVHRVGRTARVGRAGTSWLMLLPHERPWLATLTSRM
VVGQPPQRASVPLVGYDTVLYEGLGGAAREYESRATDVQMALERWVLAAPAHASLARAAF
LAHIRAYATHPASEKDLFHVNHLHLGHLAKAFALREAPQTVQRTAKREHDRQTQPKESER
ARLSSEARRQRMLANLPSESM
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgacgggctgctgctgcactttgatacgacggcgcctgcgcccaaggcacag
cgccgcgacgctaagcgtgggccgaagcccacggcgcccaagcgtgcgaagccagcgcct
gcggcagcgcgcgctcatgcgacggcggaccagcgcatgctcgcgcgcgcgcgcgagatg
gcaggcggcgagggtgcgcggccccgcacgcagggtccaggcggctacatatcctcgctg
tttgcgcgcgacgagcagaacgccgcggagccggaggctgtgccggctgcgcgtggcgcg
gcaccgacgaatgcgccgtcgggcgacgccacgtttgagcagctgggtctcgaccccatc
attgcgacgcacctgcgcgagcgcatggacgtgcatggccgtccgaccgagatccagcgc
ctggcgatcccgccgctcctcgctgcgccgccgtccgcgctggcgatgcgcgacgtgctc
atccaggcgcagaccggcagcggaaagacgctcacgtacctgctaccgatcctgcagact
ctgctgcccctgtcagaagagagctttatggaccgcagcgtcggcacgctggcgattgtg
ctcgcgccgacgcgcgagctcgcgcggcagatttaccaggtcctagagcgcctgcttacc
ctctcgctcgcgtcgacggacgaggatggcgcgcccaagcgccgcgcgcgctggatcgtg
cccggcctgctcacgggcggcagcacgaagaaccacgaaaagcagcgcctgcgcaaggga
tgcccgatcctggtatcgacgccggggcgcctgctcgaccacctgcagaacacgtcgagc
ttggatgtcggcaagtgccgctggctcgtgctcgacgaggcggaccgcctgcttgaaatg
ggctttgaggcgcagctcacaggcatcctccaggcgctcgacgggcgccgccggctcagt
gtgcgtgccgcgcgcgaggccctggcggagagcggcgcgctcccgccgggcgcgaccgac
gccgagatcaccgactcgctcggcatcgcctggtgggcgtggcgccggcgtctcgtgctg
tgcagtgcgacacttgacgagcatgtccaggcgtttgctggcacggccctgcacgacccg
ctgctcgtgcgcgcgggcgccgcgccggccgcggcgccggcggccagcgggggccctgcg
cccagcaccttctcggcgccggcgcagctggagcagcatgcggtgcttgtgccgcccaag
ctgcggctggtggtgctgctcgccctgctgcgccgcagcctgccacgcggcggcacggac
ggcgcgccggtgcgtgtcatggtgttcctgacgtgcacggacgcggtcgactttcactgg
cacgccctcggcggcgtgcgtatgggccgctcggacgagtcggcgcctgacaaggcgccg
gacgatgcgcttgcgctccgcagcgagctgctccccggcgtcttcctctaccggctgcac
gggtcgatggcccagaaagagcggatcgcctcgctgcaggcgttccatcggctgaccgac
ggcacagacgcggcgcgcgcgacgcgcggcggtgtgatgctctgcacgtcagtcgcgtcg
cgcggcttggacctgccggacgtgggctgtgtgatccagatggatgtgccgacggaaggg
ggcgtcgaagagtacgtgcaccgcgtcgggcgtacggcgcgtgtgggccgtgccggcaca
agctggctcatgctgttgccgcacgagcgcccatggctcgctacactgacgagccgcatg
gtcgtggggcagccgccacagcgtgcgtcggtcccgctggtcggttacgataccgtgctc
tacgaaggcctgggcggcgccgcgcgcgagtacgagtcgcgcgccacggacgtgcagatg
gcgctggagcgatgggtgctcgctgcgccggcgcacgcgtcgctcgcgcgcgcggcgttc
cttgcgcacattcgcgcatacgccacgcacccggcgagcgaaaaggacctgttccacgtg
aaccacctgcacctggggcaccttgcgaaggcgttcgcgctgcgggaggcgccgcagacc
gtgcagcgcactgccaagcgcgagcacgacaggcagacgcagccgaaagagtcggagcgg
gcgcgcctctcctcggaagcacggcgccagcgcatgctcgcgaacctaccctcggagtct
atgtag
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