Malassezia sympodialis: MSY001_2024
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Entry
MSY001_2024 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
msym
Malassezia sympodialis
Pathway
msym03020
RNA polymerase
msym03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSY001_2024
09124 Replication and repair
03420 Nucleotide excision repair
MSY001_2024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msym03021
]
MSY001_2024
03400 DNA repair and recombination proteins [BR:
msym03400
]
MSY001_2024
Transcription machinery [BR:
msym03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
MSY001_2024
DNA repair and recombination proteins [BR:
msym03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
MSY001_2024
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
MC_hydratase
Motif
Other DBs
NCBI-GeneID:
30056909
NCBI-ProteinID:
XP_018740572
LinkDB
All DBs
Position
Unknown
AA seq
260 aa
AA seq
DB search
MVEITVNTTVLADEFLAHRLGMIPLLSMDAAKVLIDQRLTLDALCTSDRGAMLVTSKDLV
RSNTIANMYSDEATFGPVAPRHPDFGKPVGHGTHVYLTTDDPNAPGVSIVQLRKGQHIKA
RCIARKGFAKEHAKWSPVSAVGFEYDPHNALRHTTLWYELDAKKEWPESKNAHEEEPPAE
GTPYDPSRRANRFYFDVESVGSLHPAEIVETGLSLLEYKTAQIVQELGMLLQPADAAIAA
PGGGVYNAYGAFDGVSAAYG
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggtggaaatcaccgtgaatacaacggtgttggctgatgaattcctggcgcatcgtctg
ggtatgatccccctgctcagcatggatgcagccaaagtacttatcgaccaacgtctaacc
ttggacgcgctgtgcacgtccgaccgtggtgccatgcttgtgacatccaaggacctagtc
cgcagcaataccattgcaaatatgtattcggatgaggccacttttggtcctgtcgctcct
cgtcatcctgattttggcaagccagtggggcatggtacgcacgtctatcttacgacagat
gatcccaatgcgcctggtgtatcaattgtacagcttcggaaaggtcagcacatcaaagct
cggtgcattgcacgcaaaggttttgcgaaggaacatgcaaaatggtcgcctgtgtccgct
gtcggattcgaatatgacccgcacaatgcattgcggcatacaactctttggtacgagttg
gacgccaaaaaagagtggcctgaaagcaagaatgcacacgaggaggagcctcctgccgaa
ggcacaccctatgaccctagccgtcgtgctaaccgcttctactttgacgtggagtcagtg
ggcagcttgcaccctgcagaaattgttgagactggtctctcactgctagagtacaaaact
gcacaaattgtacaagagttaggtatgctacttcagcccgccgatgctgcgatagcagcg
cccggtggtggagtgtacaatgcgtacggggcatttgacggtgtttccgctgcttacggt
tga
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integrated database retrieval system