Malassezia sympodialis: MSY001_2116
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Entry
MSY001_2116 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K14285
NTF2-related export protein 1/2
Organism
msym
Malassezia sympodialis
Pathway
msym03008
Ribosome biogenesis in eukaryotes
msym03013
Nucleocytoplasmic transport
msym03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MSY001_2116
03015 mRNA surveillance pathway
MSY001_2116
03008 Ribosome biogenesis in eukaryotes
MSY001_2116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msym03019
]
MSY001_2116
03009 Ribosome biogenesis [BR:
msym03009
]
MSY001_2116
Messenger RNA biogenesis [BR:
msym03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
MSY001_2116
Ribosome biogenesis [BR:
msym03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
MSY001_2116
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NTF2
Mtr2
NXF_NTF2
Motif
Other DBs
NCBI-GeneID:
30057001
NCBI-ProteinID:
XP_018740660
LinkDB
All DBs
Position
Unknown
AA seq
181 aa
AA seq
DB search
MDFTSNAAETFVTAYYAASDSPQRSQLLPSLYLPNSSVSWNGNPISGAAQYAQWLEAQPG
SRHEIQSFDCHPLGPYNAHGTVAHYTPESIVTKDPSNAPKSATSTGGGSKKKFDADAPIE
SYPRVFSQTFVLINGAGTNTEGGVPFVWTPAKNNKNKNQTDPDLRTVAKYFIQADSLRFV
G
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggacttcacgtccaatgcggcagagacgtttgtgacagcctattacgcagcgtctgac
tcgccacaacggtcgcaactgcttccttcactgtacctaccaaactcaagtgtatcctgg
aatggcaaccccatcagcggtgctgcccagtatgcacaatggctggaggcgcagcctggg
tctcgccacgagatccagtcctttgactgccatccacttggcccatataatgctcatggg
actgtcgctcattatacacccgaaagcattgtaaccaaggacccaagcaatgcgcccaag
tcggctacgtctacaggcggtggatctaagaaaaagtttgatgctgatgctccgattgaa
tcttacccgcgggtcttctctcaaacctttgtcctcatcaatggtgctggcaccaacaca
gaaggtggcgttccattcgtatggacacctgccaaaaacaataaaaacaagaatcagacg
gatcctgatttgcgcactgttgccaagtactttattcaagccgacagtctgcgattcgtg
ggttga
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