KEGG   Malassezia sympodialis: MSY001_2164
Entry
MSY001_2164       CDS       T06541                                 
Name
(RefSeq) uncharacterized protein
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
msym  Malassezia sympodialis
Pathway
msym03018  RNA degradation
msym03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msym00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MSY001_2164
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MSY001_2164
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msym03019]
    MSY001_2164
   03041 Spliceosome [BR:msym03041]
    MSY001_2164
Messenger RNA biogenesis [BR:msym03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     MSY001_2164
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     MSY001_2164
Spliceosome [BR:msym03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    MSY001_2164
SSDB
Motif
Pfam: LSM SM-ATX DUF6897 GRDB LSM14 CENP-W
Other DBs
NCBI-GeneID: 30057049
NCBI-ProteinID: XP_018740704
UniProt: M5EP09
LinkDB
Position
Unknown
AA seq 95 aa
MSEAGLVSAPSEDTNATNQVKAGSPNDFLKSVIGKKVVVRLNSGIDYHGTLSCLDGYMNI
AMEETTEHVDGVLKSSYGDAFIRGNNVLYITALDA
NT seq 288 nt   +upstreamnt  +downstreamnt
atgagtgaagcaggtctcgtgtcggcgcccagcgaggacaccaacgctaccaaccaagtc
aaggctggcagtccgaatgatttcctaaaaagcgtgattggtaaaaaggtcgttgtgcgc
ctcaactctggcattgactaccatggcactctctcctgtcttgatggctacatgaacatt
gctatggaggagacgaccgaacatgtggacggcgttctgaagagtagctatggtgatgcc
tttattcgcggcaacaatgtcctatacataaccgcactggatgcctag

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