Malassezia sympodialis: MSY001_2200
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Entry
MSY001_2200 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K14327
regulator of nonsense transcripts 2
Organism
msym
Malassezia sympodialis
Pathway
msym03013
Nucleocytoplasmic transport
msym03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MSY001_2200
03015 mRNA surveillance pathway
MSY001_2200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msym03019
]
MSY001_2200
Messenger RNA biogenesis [BR:
msym03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MSY001_2200
mRNA cycle factors
P-body specific factors
MSY001_2200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Dor1
Motif
Other DBs
NCBI-GeneID:
30057085
NCBI-ProteinID:
XP_018740738
LinkDB
All DBs
Position
Unknown
AA seq
757 aa
AA seq
DB search
MTVGDSSPSPTALVSEEWQTKFRRLFETYYVTLTRHASRLHASLQKQAQRNRDAYIRHGE
VFEDRQAKFERQAKETKTLMESTQAISVMLQVHGLDLPDPQNEPVQKQGLLLGAKSTLAE
MSARTEQEFASGKSPWEDEETRNFYTDVCDLRAHVPPSLLAGGAQGDDPKKASTETEELS
SLTSLLDRLPLLGNREMVDQLAIELAFYTKPATRKRLVERLLSVPKQRWDLVPYYARLIA
TLHPYMPLLVDSVVEQVDQRLRRMSLRSKMDAQTRGQAIVYLGELTKFGLVPEHIVFHMF
SRLLDDFGRVSLEMLALLLETCGRYLYRMPATNAPMQNVLDQMRRKRAAHHLEEHHGLLL
DNAYFKCVPPEYPVVVHRTLSIKEQFVVHLFEEKLTEMKMDRISQLVRALDWQDASMEDL
LFDMFTSPWRVRYEGVRVLADLLRVLHSWHAPFVVRVLDRVVEGIDTDLSRTDYMAGQQR
VARVRYLGELFQCQLIPPEAVLDQLWRLVVRRVHRPDRYDDFTRVRLVCTLLQTCGEAFS
AHPWRKRMDDFLAAFQYYLLAKPMPPVDVAYQVEQTLDQLRPRRSRHPSKAALAQRLDKI
LPLFYQRDLTSIVAGLVKTGGTEHRPGNDESDSEIPRDLRDEWASSGDESDSQDGTDSLY
ASEGEPASASDNELDPEAALDEQADDELEHELALLMAEANAAPGWLSGGGSTLERTRQAY
QGDPSASGCLDLCARAAAARAGGSGAAAAQSVCARVP
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgggggactcatccccctcacccacggcgctggtatcggaggagtggcagacc
aagtttcgtcgtttgtttgaaacctattatgtgacattgacgcgccatgcatcgcgactg
catgcgagcctccaaaagcaagcgcagcgcaaccgggacgcctatattcggcacggtgag
gtgttcgaggaccggcaagccaagtttgagcgacaagccaaggagacaaagacgcttatg
gagtcaactcaggcgatctctgtgatgcttcaagtgcatggattggacctcccggatccg
caaaatgagccagtgcagaaacagggtttgcttcttggcgccaagtccaccttggccgaa
atgagcgcacggacagagcaagaattcgcgtcggggaagagcccctgggaggatgaggag
acccgcaacttctatacagatgtgtgtgatctccgcgcgcatgtgccaccgagcttgcta
gcgggcggggcccaaggggacgatccgaaaaaggcctccacagagaccgaggagttgagc
tcgctcacgtcgctcctggatcgactgccgttgctgggcaaccgcgaaatggtggatcag
cttgcaattgagctggccttttacacgaagccggcaacgcgcaagcgccttgtggaacgg
ctgttgagcgtgcctaaacagcgatgggacctagtgccatattacgcgcgtctgatcgcc
accttgcatccgtatatgccactactggtagactcggtggttgaacaggtggaccagcga
ctgcgccgcatgagcttgcggagcaagatggatgcgcagacgcgcggtcaagcgattgtg
tacttgggcgagctcaccaagtttgggctggtgcctgagcatattgtcttccacatgttt
agcaggctactggatgactttggtcgcgtgtcgctggaaatgctggccctgttgctcgag
acgtgtgggcggtacctgtaccgaatgcctgccacgaatgcgcctatgcagaacgtgctg
gatcagatgcgccggaagcgcgcggcgcaccacctagaagagcaccacggcctgctgctg
gacaatgcgtattttaagtgtgtgccgcccgaataccctgtggtggtgcaccgaacgttg
tcgatcaaagagcaatttgtggtgcacctcttcgaggagaagctgacggagatgaaaatg
gaccgaataagccagctggtgcgcgcgctcgactggcaggacgcgagtatggaggacctg
ttgtttgacatgttcacgtcgccgtggcgtgtccgctacgagggcgtgcgggtcctcgcc
gacctgttgcgcgtactgcactcgtggcacgctccgtttgtggtgcgtgtgctggaccgg
gtggtggagggcattgatacagacctgagccggaccgattatatggccggacagcagcgt
gtggcgcgtgtgcgctacctgggggagctgttccaatgccaactgataccccctgaagcc
gtgttggaccagctctggcggctggtggtgcgccgtgtgcaccgccccgaccgctacgac
gacttcacgcgtgtgcgccttgtgtgcacccttctgcagacgtgtggtgaggcgtttagt
gcccatccatggcgtaagcgcatggacgactttttggcagcgttccagtactacctgctc
gctaagccgatgccgcccgtggacgtggcgtaccaagtggagcaaacactggaccagctg
cggccccgccgctcgcgtcatccctccaaggctgcgctcgcgcagcgtttggacaaaatt
ctgccgctgttttaccagcgggacctgacgagtattgtggctgggcttgtcaagacgggc
ggcacagagcatcgccccgggaacgacgagtccgacagtgagataccccgtgacctgcgt
gacgagtgggcgagctccggtgacgagtcagacagtcaggacggtactgattcgctgtat
gcatcggagggtgagccagcgagtgcgtcggacaacgagctggatcctgaggcggcgctc
gacgagcaagcggacgacgagttagagcatgagcttgcgctgcttatggccgaggcgaat
gcggcgccgggctggctcagcgggggtggctcgacgctagagcgcacgcggcaggcctac
caaggagatccaagtgccagcggctgcctcgatctctgtgcgcgcgcggcagcagcaaga
gcaggaggcagcggagcggcagcagctcaaagcgtatgtgctcgcgtaccgtga
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