KEGG   Malassezia sympodialis: MSY001_2236
Entry
MSY001_2236       CDS       T06541                                 
Name
(RefSeq) uncharacterized protein
  KO
K03002  DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
Organism
msym  Malassezia sympodialis
Pathway
msym03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:msym00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MSY001_2236
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msym03021]
    MSY001_2236
Enzymes [BR:msym01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     MSY001_2236
Transcription machinery [BR:msym03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     MSY001_2236
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpa2_4 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7
Other DBs
NCBI-GeneID: 30057121
NCBI-ProteinID: XP_018740771
UniProt: M5EP99
LinkDB
Position
Unknown
AA seq 1240 aa
MRSASPSSDSSGPGTPPEESPLAKDRMHDDIWDAPYTFHTLDMQRRFMKPSSHTWDVKAL
REITRPHIESFNALWSEDPSIDVPGGADRIGMEGAGLLERSLQTLAPRVVFDAHGGEGEL
GNRLEMRIDSVSLSRPMVPDRAKDALDRRVFPDECRNRLVSYRGRLTARVSWRVNDGPEQ
SDLRDLGQVPIMVGSNRCHLRGLTSQDLVAHHEEPNEMGGYFIINGNERLIRFLILAKAN
HAMAIERSSFTRRGPSYSNKAVSIRCVGRHDLISVTNSVHYLENGGATLRFSWRKQEYMV
PIVMVLKALVSATDKEIFTSIVQTDTDNTFLTDRVELLLRGFHRYALWTGEQCLEYLGDK
FRVVMRAPEDWSNAQVGEDLINRLVLTHLEMPRDKYRMLVFMLRKLYAFVAGECCADNPD
SPQHQDVLMPGFLYGAIIQERLDEYLINVRAQLARDVRAGAPGCDFFDRRYIQRTLGKVN
SDVGARLSSFLATGNLSSPSGLDLQQVGGFTIVAEKLNFYRFLSHFRSVHRGAFFAELKT
TTVRKLLPEAWGFLCPVHTPDGSPCGLLNHFAHACQLTTRDLDVSQVPALLASLGMTEVV
AAHVSPRTHVTVQLNGTLLGYATPALARHMATVLRVWKTEGRHGVPLDLEVGFVPTSLGG
QYPGLYLFGGRARMVRPVTYLFNGREDHVGPFEQVYLDIACRRPEIEAGVSTHVEVSPTH
VLSVVANLTPFSDFNQSPRNMYQCQMGKQTMGTPSGAISRRTDNKLYRLQSGQTPVVRPA
LHHRYAMDDFPNGTNAIVAVISYTGYDMEDAMILNKSAHERGFGYGTVYKSEVVHLRDAG
GGRGGGQALLLGWGPDIRADDPRRAQLDVDGLPRVGTPMTKGTPLCAYYNEASGRTRLQR
YKGDEAAYVDTVRVIGTDTGDGPCQRVQITFRVPRAPVIGDKFSSRHGQKGVCSQKWPAV
DMPFSESGMQPDVIINPHAFPSRMTIGMLIESMAGKAGAMHGLAQDATPWTFGEDDTPVE
YFGEQLRAAGYNYLGNEPMYSGITGQELRADIYLGVVFYQRLRHMVNDKFQVRTTGPVHA
LTRQPVKGRKRAGGIRFGEMERDALLAHGTSFLLQDRLFHCSDATTAYVCRTCGSLLSVA
YDDAAGISVPGLGTVQAIEKSAHRTAPLGPRGEYCRVCRRAAEAGAPPPAAAPEHRVPVP
RHCVVRRTGDLDVVAVPYVLKYLVAELAAMGLRMSFAVAP
NT seq 3723 nt   +upstreamnt  +downstreamnt
atgcgaagtgcgtcgccgtcgtccgactcgtcgggccccggtacgccgcctgaggagtcg
cctctggcgaaggaccgtatgcacgatgacatatgggatgcaccctatacgtttcacacg
ctggatatgcagcgacgcttcatgaagccgtcgtcgcacacctgggatgtcaaggcgctc
cgggagattacgcgcccacatatcgagagcttcaatgcactgtggtccgaggacccgtcc
attgatgtaccgggcggtgcagatcggatcgggatggagggtgcgggcctgcttgagcgc
agcctgcaaacgcttgcgccgcgcgtggtatttgacgcgcacggcggcgagggcgagctg
ggcaaccgcctcgagatgcggatcgactcggtgtctcttagtcggccgatggtgccggac
cgtgccaaggacgcgctggaccggcgagtattcccggacgagtgccggaaccgccttgta
tcgtatcgcgggcggctcactgcgcgggtatcgtggcgcgtcaacgacggcccggagcag
agcgacctgcgcgatctggggcaggtcccgatcatggttgggtcgaaccggtgccacctg
cgcggtctcacgtcgcaggacctcgttgcgcaccacgaggagccgaacgagatgggcggc
tactttatcatcaacggcaacgagcgactgatccgcttcctgatcctggccaaggcgaac
cacgcgatggcgatcgagcgctcgtcgttcacgcgccgtggcccctcctactcgaacaag
gccgtgtcgatccgctgtgtcgggcggcacgatctgatcagtgtgaccaactcggtgcac
tatctcgaaaatggcggtgcgaccctgcgctttagctggcggaagcaagagtacatggtt
cctattgtgatggtgctcaaggcgctcgtgagcgccacggacaaggagatcttcacgtcc
attgtgcagacggacacggacaatacgttcctcacggaccgcgtcgagctgctgctccgt
ggcttccaccggtacgcgctgtggaccggcgagcagtgcctcgagtacctcggcgacaag
ttccgcgtcgtgatgcgcgcgcccgaggactggagcaacgcgcaggtcggcgaggacctg
atcaaccgccttgtgctgacgcacctcgagatgccgcgcgacaagtaccgcatgctcgtg
ttcatgctgcgcaagttgtacgcgtttgtcgcgggcgagtgctgtgcggacaaccccgac
agcccgcagcaccaggatgtgctgatgcccggctttttgtacggcgcgattatccaggag
cgcctcgacgagtacctgatcaacgtgcgtgcgcagctggcgcgcgacgtgcgggctggc
gcgcctgggtgcgacttcttcgaccgccggtacatccagcgcacgctcggcaaagtgaac
agcgacgtgggcgcgcgtctctcttcgttcctggcgacgggcaacctgagctcgccgagt
ggcctcgacctgcagcaggtcggtggctttacgatcgtcgccgagaagctcaacttttac
cgtttcctctcgcacttccgcagcgtgcaccgtggtgcctttttcgccgagctcaagacc
acgacagtgcgtaagctgctgcccgaggcgtggggctttctgtgcccggtgcacacgccc
gacggtagcccgtgtggcctgctgaaccactttgcgcacgcgtgccagctgacgacgcgc
gacctcgatgtgtcgcaggtgccggcgctgctcgcgtcgctcggtatgaccgaggtcgtg
gctgcgcatgtgagtccgcgcacgcacgtcacggtgcagctgaacggcacgctcctgggc
tacgcgacgcctgcgctcgcgcggcacatggctacggtgctgcgtgtgtggaagacggag
gggcggcatggcgtgccgctcgacctcgaggtcggcttcgtgccgacgagtctgggcggc
cagtaccccggcctctacctgtttggcggtcgcgcgcgcatggtgcgccccgtcacctac
ctgttcaacgggcgcgaggaccacgtgggtccgtttgagcaggtgtacctggacattgcg
tgccggcgccccgagattgaggctggcgtctcgacgcacgtcgaggtgtcgccgacgcat
gtgctgagcgtggtggcgaacctcacgcccttctccgacttcaaccagagtccccgcaac
atgtaccagtgccagatgggcaagcagacgatgggcacgccgagcggcgccatttcgcgg
cgcacggacaacaagctgtatcgcctgcagagtgggcagacgcccgtcgtgcgccctgcg
ctgcaccaccggtacgccatggacgactttccgaacggcacgaatgcgatcgtagccgtc
atctcctacacgggctacgacatggaggacgccatgatcctcaacaagtctgcgcacgag
cgcggctttgggtacggcaccgtgtacaagtccgaggtcgtgcacctgcgcgacgccggc
ggcggccgtggcggcggccaggcgctgctcctcggatggggcccggacatccgtgcggac
gacccgcggcgcgcgcagctcgatgtggacggcctcccccgcgtcggcacgccgatgacg
aagggcacgccgctgtgcgcctactacaacgaggcgagcggccgcacgcggctccagcgc
tacaagggcgacgaggccgcgtacgtcgacaccgtccgtgtgattggcaccgacacaggc
gacggcccgtgccagcgtgtgcagatcacgttccgcgtgccgcgtgcgccggtgattggc
gacaagttcagctcgcggcacgggcagaagggtgtctgctcgcaaaagtggccggcggtc
gacatgccgttcagcgagagcggcatgcagccggacgtgatcatcaacccccacgcgttc
ccgagtcgtatgacgatcggcatgcttatcgagagcatggccggcaaggccggcgccatg
cacggcctggcgcaggacgcgacgccgtggacgtttggcgaggacgacacgcccgtggag
tactttggcgagcagctgcgcgcggcaggctacaactacctcggcaacgagcccatgtac
tcgggcatcacgggccaggagctgcgcgcggacatatacctcggcgtcgtgttctaccag
cgcctgcgtcacatggtcaacgacaagttccaggtgcgcacgaccggtccggtgcatgcg
ctcacgcgccagcccgtcaagggccgcaagcgcgcgggcggtatccgcttcggtgagatg
gagcgcgatgccctgctggcgcacggcacgtcgttcctgctgcaggaccgcctgttccac
tgctcggacgcgacgaccgcgtacgtgtgccgcacctgcggcagcctgctctcggtcgcg
tacgacgacgcggccggcatttccgtgccgggcctcggcaccgtgcaggccatcgagaag
tcggcccaccgcaccgcgcccctcggcccgcgcggcgagtactgccgcgtgtgccgccgc
gccgcggaggcgggcgcaccgccgccggccgcggcccccgagcaccgtgtgccggtgccg
cgccactgcgtggtgcgccgcactggcgacctcgatgtggtggccgtcccgtacgtgctc
aagtacctggtcgcggagcttgcggctatgggactgcgcatgagcttcgctgtagcgccg
tag

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