Malassezia sympodialis: MSY001_2236
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Entry
MSY001_2236 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
msym
Malassezia sympodialis
Pathway
msym03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSY001_2236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msym03021
]
MSY001_2236
Enzymes [BR:
msym01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSY001_2236
Transcription machinery [BR:
msym03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
MSY001_2236
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
Motif
Other DBs
NCBI-GeneID:
30057121
NCBI-ProteinID:
XP_018740771
UniProt:
M5EP99
LinkDB
All DBs
Position
Unknown
AA seq
1240 aa
AA seq
DB search
MRSASPSSDSSGPGTPPEESPLAKDRMHDDIWDAPYTFHTLDMQRRFMKPSSHTWDVKAL
REITRPHIESFNALWSEDPSIDVPGGADRIGMEGAGLLERSLQTLAPRVVFDAHGGEGEL
GNRLEMRIDSVSLSRPMVPDRAKDALDRRVFPDECRNRLVSYRGRLTARVSWRVNDGPEQ
SDLRDLGQVPIMVGSNRCHLRGLTSQDLVAHHEEPNEMGGYFIINGNERLIRFLILAKAN
HAMAIERSSFTRRGPSYSNKAVSIRCVGRHDLISVTNSVHYLENGGATLRFSWRKQEYMV
PIVMVLKALVSATDKEIFTSIVQTDTDNTFLTDRVELLLRGFHRYALWTGEQCLEYLGDK
FRVVMRAPEDWSNAQVGEDLINRLVLTHLEMPRDKYRMLVFMLRKLYAFVAGECCADNPD
SPQHQDVLMPGFLYGAIIQERLDEYLINVRAQLARDVRAGAPGCDFFDRRYIQRTLGKVN
SDVGARLSSFLATGNLSSPSGLDLQQVGGFTIVAEKLNFYRFLSHFRSVHRGAFFAELKT
TTVRKLLPEAWGFLCPVHTPDGSPCGLLNHFAHACQLTTRDLDVSQVPALLASLGMTEVV
AAHVSPRTHVTVQLNGTLLGYATPALARHMATVLRVWKTEGRHGVPLDLEVGFVPTSLGG
QYPGLYLFGGRARMVRPVTYLFNGREDHVGPFEQVYLDIACRRPEIEAGVSTHVEVSPTH
VLSVVANLTPFSDFNQSPRNMYQCQMGKQTMGTPSGAISRRTDNKLYRLQSGQTPVVRPA
LHHRYAMDDFPNGTNAIVAVISYTGYDMEDAMILNKSAHERGFGYGTVYKSEVVHLRDAG
GGRGGGQALLLGWGPDIRADDPRRAQLDVDGLPRVGTPMTKGTPLCAYYNEASGRTRLQR
YKGDEAAYVDTVRVIGTDTGDGPCQRVQITFRVPRAPVIGDKFSSRHGQKGVCSQKWPAV
DMPFSESGMQPDVIINPHAFPSRMTIGMLIESMAGKAGAMHGLAQDATPWTFGEDDTPVE
YFGEQLRAAGYNYLGNEPMYSGITGQELRADIYLGVVFYQRLRHMVNDKFQVRTTGPVHA
LTRQPVKGRKRAGGIRFGEMERDALLAHGTSFLLQDRLFHCSDATTAYVCRTCGSLLSVA
YDDAAGISVPGLGTVQAIEKSAHRTAPLGPRGEYCRVCRRAAEAGAPPPAAAPEHRVPVP
RHCVVRRTGDLDVVAVPYVLKYLVAELAAMGLRMSFAVAP
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagtgcgtcgccgtcgtccgactcgtcgggccccggtacgccgcctgaggagtcg
cctctggcgaaggaccgtatgcacgatgacatatgggatgcaccctatacgtttcacacg
ctggatatgcagcgacgcttcatgaagccgtcgtcgcacacctgggatgtcaaggcgctc
cgggagattacgcgcccacatatcgagagcttcaatgcactgtggtccgaggacccgtcc
attgatgtaccgggcggtgcagatcggatcgggatggagggtgcgggcctgcttgagcgc
agcctgcaaacgcttgcgccgcgcgtggtatttgacgcgcacggcggcgagggcgagctg
ggcaaccgcctcgagatgcggatcgactcggtgtctcttagtcggccgatggtgccggac
cgtgccaaggacgcgctggaccggcgagtattcccggacgagtgccggaaccgccttgta
tcgtatcgcgggcggctcactgcgcgggtatcgtggcgcgtcaacgacggcccggagcag
agcgacctgcgcgatctggggcaggtcccgatcatggttgggtcgaaccggtgccacctg
cgcggtctcacgtcgcaggacctcgttgcgcaccacgaggagccgaacgagatgggcggc
tactttatcatcaacggcaacgagcgactgatccgcttcctgatcctggccaaggcgaac
cacgcgatggcgatcgagcgctcgtcgttcacgcgccgtggcccctcctactcgaacaag
gccgtgtcgatccgctgtgtcgggcggcacgatctgatcagtgtgaccaactcggtgcac
tatctcgaaaatggcggtgcgaccctgcgctttagctggcggaagcaagagtacatggtt
cctattgtgatggtgctcaaggcgctcgtgagcgccacggacaaggagatcttcacgtcc
attgtgcagacggacacggacaatacgttcctcacggaccgcgtcgagctgctgctccgt
ggcttccaccggtacgcgctgtggaccggcgagcagtgcctcgagtacctcggcgacaag
ttccgcgtcgtgatgcgcgcgcccgaggactggagcaacgcgcaggtcggcgaggacctg
atcaaccgccttgtgctgacgcacctcgagatgccgcgcgacaagtaccgcatgctcgtg
ttcatgctgcgcaagttgtacgcgtttgtcgcgggcgagtgctgtgcggacaaccccgac
agcccgcagcaccaggatgtgctgatgcccggctttttgtacggcgcgattatccaggag
cgcctcgacgagtacctgatcaacgtgcgtgcgcagctggcgcgcgacgtgcgggctggc
gcgcctgggtgcgacttcttcgaccgccggtacatccagcgcacgctcggcaaagtgaac
agcgacgtgggcgcgcgtctctcttcgttcctggcgacgggcaacctgagctcgccgagt
ggcctcgacctgcagcaggtcggtggctttacgatcgtcgccgagaagctcaacttttac
cgtttcctctcgcacttccgcagcgtgcaccgtggtgcctttttcgccgagctcaagacc
acgacagtgcgtaagctgctgcccgaggcgtggggctttctgtgcccggtgcacacgccc
gacggtagcccgtgtggcctgctgaaccactttgcgcacgcgtgccagctgacgacgcgc
gacctcgatgtgtcgcaggtgccggcgctgctcgcgtcgctcggtatgaccgaggtcgtg
gctgcgcatgtgagtccgcgcacgcacgtcacggtgcagctgaacggcacgctcctgggc
tacgcgacgcctgcgctcgcgcggcacatggctacggtgctgcgtgtgtggaagacggag
gggcggcatggcgtgccgctcgacctcgaggtcggcttcgtgccgacgagtctgggcggc
cagtaccccggcctctacctgtttggcggtcgcgcgcgcatggtgcgccccgtcacctac
ctgttcaacgggcgcgaggaccacgtgggtccgtttgagcaggtgtacctggacattgcg
tgccggcgccccgagattgaggctggcgtctcgacgcacgtcgaggtgtcgccgacgcat
gtgctgagcgtggtggcgaacctcacgcccttctccgacttcaaccagagtccccgcaac
atgtaccagtgccagatgggcaagcagacgatgggcacgccgagcggcgccatttcgcgg
cgcacggacaacaagctgtatcgcctgcagagtgggcagacgcccgtcgtgcgccctgcg
ctgcaccaccggtacgccatggacgactttccgaacggcacgaatgcgatcgtagccgtc
atctcctacacgggctacgacatggaggacgccatgatcctcaacaagtctgcgcacgag
cgcggctttgggtacggcaccgtgtacaagtccgaggtcgtgcacctgcgcgacgccggc
ggcggccgtggcggcggccaggcgctgctcctcggatggggcccggacatccgtgcggac
gacccgcggcgcgcgcagctcgatgtggacggcctcccccgcgtcggcacgccgatgacg
aagggcacgccgctgtgcgcctactacaacgaggcgagcggccgcacgcggctccagcgc
tacaagggcgacgaggccgcgtacgtcgacaccgtccgtgtgattggcaccgacacaggc
gacggcccgtgccagcgtgtgcagatcacgttccgcgtgccgcgtgcgccggtgattggc
gacaagttcagctcgcggcacgggcagaagggtgtctgctcgcaaaagtggccggcggtc
gacatgccgttcagcgagagcggcatgcagccggacgtgatcatcaacccccacgcgttc
ccgagtcgtatgacgatcggcatgcttatcgagagcatggccggcaaggccggcgccatg
cacggcctggcgcaggacgcgacgccgtggacgtttggcgaggacgacacgcccgtggag
tactttggcgagcagctgcgcgcggcaggctacaactacctcggcaacgagcccatgtac
tcgggcatcacgggccaggagctgcgcgcggacatatacctcggcgtcgtgttctaccag
cgcctgcgtcacatggtcaacgacaagttccaggtgcgcacgaccggtccggtgcatgcg
ctcacgcgccagcccgtcaagggccgcaagcgcgcgggcggtatccgcttcggtgagatg
gagcgcgatgccctgctggcgcacggcacgtcgttcctgctgcaggaccgcctgttccac
tgctcggacgcgacgaccgcgtacgtgtgccgcacctgcggcagcctgctctcggtcgcg
tacgacgacgcggccggcatttccgtgccgggcctcggcaccgtgcaggccatcgagaag
tcggcccaccgcaccgcgcccctcggcccgcgcggcgagtactgccgcgtgtgccgccgc
gccgcggaggcgggcgcaccgccgccggccgcggcccccgagcaccgtgtgccggtgccg
cgccactgcgtggtgcgccgcactggcgacctcgatgtggtggccgtcccgtacgtgctc
aagtacctggtcgcggagcttgcggctatgggactgcgcatgagcttcgctgtagcgccg
tag
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