Malassezia sympodialis: MSY001_2241
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Entry
MSY001_2241 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K13126
polyadenylate-binding protein
Organism
msym
Malassezia sympodialis
Pathway
msym03015
mRNA surveillance pathway
msym03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MSY001_2241
09123 Folding, sorting and degradation
03018 RNA degradation
MSY001_2241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msym03019
]
MSY001_2241
03041 Spliceosome [BR:
msym03041
]
MSY001_2241
Messenger RNA biogenesis [BR:
msym03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
MSY001_2241
mRNA cycle factors
Stress granule specific factors
MSY001_2241
Spliceosome [BR:
msym03041
]
Complex C
Other components
Complex C specific factors
MSY001_2241
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_10
RRM_occluded
RRM_7
RBD_DEAH11
RRM_RdRP1_2
RRM_YTH1
Motif
Other DBs
NCBI-GeneID:
30057126
NCBI-ProteinID:
XP_018740776
UniProt:
M5EPA6
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MSAEAASTQPAATNPPAESAPVTETPAAAPAAAEAPAEEKPAEKKEDEKPKASQGSVNTS
LYVGELDPNVNEAILFEIFNMVGPVSSIRVCRDAVTRRSLGYAYVNFLNAEDSERALEQL
NYTPIRGRPCRIMWSQRDPGQRRAGQGNIFIKNLDEAIDNKALHDTFAAFGKILSCKVAS
NEQGSLGYGFVHYESKEAAEAAIKHVNGMLLNDKKVYVGHHISKKDRQAKIEEARAQYTN
VYVKNLDPAVTQEEFEKLFDKYGTITSAALATDEEGKSRGFGFVNFAEHAQAAKAVEELN
DTEFHGQKLFLGRAQKKSEREEELRKAYEAAKNEKLSKYQGVNLYIKNLPEEFDDERLQE
EFAPFGTTTSAKVMRTPTGASRGFGFVCYSAPEEANKAVAEMNGKMIENRPLYVALAQRK
DVRHQQLAAQMMQHNQLRLQQQQAAAAAAAQMYPGAPGMYYPQPPAQFPGQVRPQYPPGM
MQGMPPMAGAPGAPYPGQFPAGGMFPQGYRPPRPPRGAAPTAGAAPAGVQRGQGAPVPVA
VPAQPEALTAAALANASPEEQKQMLGEAIYPKIAASQPQLAGKLTGMILELPVGELLHLL
EDDEALSSKVDEALTVLREYESREGAEATA
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgaagccgcttcgacgcagcctgctgctaccaaccctcctgccgagtcggcc
ccggtgaccgagaccccggccgcggcgcctgcggccgccgaggctcctgcagaggagaag
cctgctgagaagaaggaggatgagaagcccaaggccagccagggctcggtgaacacctcg
ctctacgtgggtgagctggacccgaatgtgaacgaggccatcctgttcgagatcttcaac
atggtcggccccgtgagcagcatccgtgtgtgccgtgatgcggtgactcgtcgctcgctg
ggctacgcgtacgtgaactttttgaatgcggaggacagtgagcgtgcgctggagcagctg
aactacacgccgatccgcggccgcccgtgccgtatcatgtggtcgcagcgtgaccccggt
cagcgccgtgcgggccagggcaatatcttcatcaagaacctggacgaggccatcgacaac
aaggcgctgcacgacaccttcgcggccttcggcaagattttgtcgtgcaaggtggcgtcg
aacgagcagggcagtcttggctacggcttcgtgcactacgagtcgaaggaggcggctgag
gcggcgatcaagcacgtcaacggcatgcttctgaacgacaagaaggtgtacgtgggccac
cacatctcgaagaaggaccgccaggccaagatcgaggaggcgcgtgcgcagtacacgaac
gtgtacgtgaagaacctcgaccctgctgtgacgcaggaggagtttgagaagctctttgac
aagtacggcacgatcacctcggctgccctggccaccgacgaggagggcaagagccgtggc
tttggctttgtcaactttgccgagcacgcgcaggcggcgaaggcggtcgaggagctcaac
gacacggagttccacggccagaagctgttcctgggtcgtgcacagaagaagtcggagcgt
gaggaggagctgcgcaaggcgtacgaggcggcgaagaacgaaaagctgtccaagtaccag
ggcgtgaacctgtacatcaagaacctgccggaggagtttgacgacgagcgcctccaggaa
gagtttgcgccgtttggcaccacgacgtcggccaaggtgatgcgcacgcccaccggcgcg
tcgcgcggctttggctttgtgtgctactcggcgcccgaggaggcgaacaaggccgtggcg
gagatgaacggcaagatgatcgaaaaccgtccgctgtacgtggcgctcgcgcagcgcaag
gacgtgcgccaccagcagctcgccgcgcagatgatgcagcacaaccagctgcgtctgcag
cagcagcaggctgccgctgccgccgctgcgcagatgtaccccggcgcccccggcatgtac
tacccccagccgcccgcgcagttccccggccaggtgcgtccgcagtacccgccgggcatg
atgcagggcatgcccccgatggctggcgcgccgggcgcgccgtaccccggccagttcccc
gcgggcggcatgttcccgcagggctaccgcccgccgcgcccgccgcgtggcgctgcgccc
actgctggtgcggcccccgctggcgtgcagcgtggccagggtgcgccggtgcccgtcgcg
gtgcctgcgcagcccgaggcgctcaccgccgcagcgctcgcgaatgcgtcgccggaggag
cagaagcagatgcttggtgaggcgatctaccccaagattgctgcgtcgcagccgcagctc
gctggtaagctgacgggtatgattctcgagctgccggtcggcgagctgctgcatctgctc
gaggacgacgaggctctgagcagcaaggttgacgaggcgctgacggtgcttcgcgagtac
gagagccgcgagggcgccgaggcgacggcctag
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