Malassezia sympodialis: MSY001_2270
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Entry
MSY001_2270 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K10754
replication factor C subunit 1
Organism
msym
Malassezia sympodialis
Pathway
msym03030
DNA replication
msym03410
Base excision repair
msym03420
Nucleotide excision repair
msym03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSY001_2270
03410 Base excision repair
MSY001_2270
03420 Nucleotide excision repair
MSY001_2270
03430 Mismatch repair
MSY001_2270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msym03032
]
MSY001_2270
03400 DNA repair and recombination proteins [BR:
msym03400
]
MSY001_2270
DNA replication proteins [BR:
msym03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
MSY001_2270
DNA repair and recombination proteins [BR:
msym03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
MSY001_2270
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
Rad17
AAA
AAA_14
AAA_16
nSTAND3
AAA_33
AAA_30
AAA_19
SAGA-Tad1
AAA_22
NTPase_1
Motif
Other DBs
NCBI-GeneID:
30057155
NCBI-ProteinID:
XP_018740805
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MSGPSTRANDGAEPSAKRVKVEGKGVPPWKAAAERRAAGPAAPGSKPIPEGRPNCLAGLT
LVFTGELSSLGRDDAVDLAKRYGAYVAILTCSKVTTAPSSKTSFVVVGEGAGAKKLETIQ
KNRLKTLDEDGFLQLIAERGAQKLDERVKDKLAAEEKKVQAAARALETSSAPGQLWTSKY
APKQLKELVGNKSNVEKLQAWLRDWPKSLQANFKKPGPHATNTFRAMLISGAPGIGKTTA
VHLVCKLEGYEVLELNASDTRSKRLLESELSQTIHNRSIGDWAKPGTAKLGRLAIVLDEV
DGMSGGDRGGIGAINALIRKTQVPIICICNDRRNPKMQPLYSTTFNMTFAKPTVQAIRSR
MLSIAFREGLQIPAEVMDQLIAAAQSDLRLVTNMLSTWKLSHKRMSFDEGKKFGAANQKP
TLQTPFSLYGELASPQRFGPLNKQSLNDKLDYYFQDHAFVPLMVAENYIKSQPVLAQRES
VPALKEWKQLQLLRNASESISDGDLVDTLMHGPQQHWSLMPLHGIASSVRPCSYIYGGHS
SFPAFPSFLGQNSKRMRLQRQLVDLQTRLRLSTTGSKDDVRQSYVPGLLSVLVDPILQAG
QAAIPGVIDTMDEYYLLPEDRETLVELELGDVRREDRLKKVPAAVKSAFTRAYNARSQYV
SCTDSSPMAFLKTAAPTPKGRAIKTEMPDNEEAYGADEEPAEDADDEADAQADLDPTKDA
LLRPAKRPKSAARSRASK
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgagcggccccagcacgcgcgcgaacgacggagcggagccgagcgcgaagcgcgtcaag
gtcgagggcaagggtgtgccgccatggaaagcggccgctgagcgccgggcggcgggtccg
gcggcgcctggcagcaagccgatccctgagggccggccgaactgccttgcgggcctcacg
ctcgtgtttacgggcgagctgtcgagtcttgggcgcgacgatgcggtggatctcgccaag
cgatatggagcgtacgtggcgatactaacatgcagcaaggtcacgacggcgccctcgtcc
aagacctctttcgtcgtggtcggtgaaggcgcgggggccaagaagctcgagaccatccag
aagaaccgattaaagacacttgatgaagacgggttccttcagctgatcgctgagcgcggc
gcacagaaactcgacgagcgtgtcaaggacaaactcgccgccgaggagaaaaaggtccag
gcggctgcgcgcgcgctcgagacgtccagcgcgcctggccagctgtggacgtccaagtac
gcgccgaagcagctcaaggagctcgttgggaacaagtccaacgtcgaaaagctgcaggcc
tggctgcgcgactggcccaagtcgctgcaggccaattttaagaagccggggccgcatgcg
accaacacgttccgcgcgatgctgatttccggcgcgccgggcattggcaagacgacggcg
gtacatctggtgtgcaagcttgagggatacgaggtgctggagctgaatgcgagcgataca
cggagcaagaggctgctcgagagcgagctgagccagaccatccacaaccgctcgatcggc
gactgggccaagcccggcacggcgaaactggggcgcctcgcgatcgtactcgatgaagtc
gatggtatgtcaggcggcgaccgtggcggcattggcgcgatcaacgcgctgatccgcaag
acgcaggtgcccatcatctgcatctgcaacgaccggcgcaaccccaagatgcagccactg
tactcgacgacattcaacatgacctttgcgaagccgacggtccaggccattcgctcgcgc
atgctgtcgattgcgtttcgcgagggcctccagatccctgccgaggtcatggaccagctc
atcgcggccgcccaaagcgacctgcgtctcgtgaccaacatgctgtcgacgtggaagctg
tcgcacaagcgcatgtcgtttgatgaaggcaagaagtttggcgccgcgaaccaaaagccc
acgctgcaaacacccttctcgctgtacggcgagctggcgagtccccagcgctttggaccg
ctcaataagcagtcgctcaacgacaagctggattactactttcaggaccatgcattcgtg
cccctgatggtcgctgagaactacatcaagagccagcccgtgcttgcgcagcgggagtcg
gtgccggccctcaaggagtggaagcagctgcagctcctgcgcaatgcgtccgagtcgatc
tcggatggcgacctggtggacacgctcatgcatggaccgcagcagcactggtcgctcatg
ccactgcacggcattgcgagcagtgtgcgcccctgctcgtacatttacggcgggcattca
tcgttccccgcgttcccctccttcttgggccaaaactccaagcgcatgcgtctgcagcgc
caactcgtggacctgcagacccgcctgcgtcttagcactacaggctcgaaagacgacgtg
cgccagtcgtacgtgccaggtctgctctcggtgctcgtggatccaattttgcaggcgggt
caggcggccatcccaggcgtcatcgatactatggacgagtactacctcctgcccgaggac
cgtgagacgctcgtggagctcgagctgggcgacgtgcggcgcgaggaccggctcaagaag
gtgccagcggccgttaaatcggctttcacgcgcgcctacaatgctcgcagccagtacgta
tcctgcactgactccagtccgatggcattcctgaaaacggcggcgccaacgcccaagggc
cgcgcgatcaagaccgagatgcccgacaacgaagaggcttacggggcggatgaggagcct
gccgaagacgcagacgacgaggcggatgcccaggccgacctggatcctaccaaggatgcg
ctcctgcgaccggccaaacggccaaagagcgctgctcgatctcgagcgtccaagtaa
DBGET
integrated database retrieval system