KEGG   Malassezia sympodialis: MSY001_2270
Entry
MSY001_2270       CDS       T06541                                 
Name
(RefSeq) uncharacterized protein
  KO
K10754  replication factor C subunit 1
Organism
msym  Malassezia sympodialis
Pathway
msym03030  DNA replication
msym03410  Base excision repair
msym03420  Nucleotide excision repair
msym03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:msym00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSY001_2270
   03410 Base excision repair
    MSY001_2270
   03420 Nucleotide excision repair
    MSY001_2270
   03430 Mismatch repair
    MSY001_2270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msym03032]
    MSY001_2270
   03400 DNA repair and recombination proteins [BR:msym03400]
    MSY001_2270
DNA replication proteins [BR:msym03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    MSY001_2270
DNA repair and recombination proteins [BR:msym03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     MSY001_2270
SSDB
Motif
Pfam: RFC1 BRCT Rad17 AAA AAA_14 AAA_16 nSTAND3 AAA_33 AAA_30 AAA_19 SAGA-Tad1 AAA_22 NTPase_1
Other DBs
NCBI-GeneID: 30057155
NCBI-ProteinID: XP_018740805
LinkDB
Position
Unknown
AA seq 738 aa
MSGPSTRANDGAEPSAKRVKVEGKGVPPWKAAAERRAAGPAAPGSKPIPEGRPNCLAGLT
LVFTGELSSLGRDDAVDLAKRYGAYVAILTCSKVTTAPSSKTSFVVVGEGAGAKKLETIQ
KNRLKTLDEDGFLQLIAERGAQKLDERVKDKLAAEEKKVQAAARALETSSAPGQLWTSKY
APKQLKELVGNKSNVEKLQAWLRDWPKSLQANFKKPGPHATNTFRAMLISGAPGIGKTTA
VHLVCKLEGYEVLELNASDTRSKRLLESELSQTIHNRSIGDWAKPGTAKLGRLAIVLDEV
DGMSGGDRGGIGAINALIRKTQVPIICICNDRRNPKMQPLYSTTFNMTFAKPTVQAIRSR
MLSIAFREGLQIPAEVMDQLIAAAQSDLRLVTNMLSTWKLSHKRMSFDEGKKFGAANQKP
TLQTPFSLYGELASPQRFGPLNKQSLNDKLDYYFQDHAFVPLMVAENYIKSQPVLAQRES
VPALKEWKQLQLLRNASESISDGDLVDTLMHGPQQHWSLMPLHGIASSVRPCSYIYGGHS
SFPAFPSFLGQNSKRMRLQRQLVDLQTRLRLSTTGSKDDVRQSYVPGLLSVLVDPILQAG
QAAIPGVIDTMDEYYLLPEDRETLVELELGDVRREDRLKKVPAAVKSAFTRAYNARSQYV
SCTDSSPMAFLKTAAPTPKGRAIKTEMPDNEEAYGADEEPAEDADDEADAQADLDPTKDA
LLRPAKRPKSAARSRASK
NT seq 2217 nt   +upstreamnt  +downstreamnt
atgagcggccccagcacgcgcgcgaacgacggagcggagccgagcgcgaagcgcgtcaag
gtcgagggcaagggtgtgccgccatggaaagcggccgctgagcgccgggcggcgggtccg
gcggcgcctggcagcaagccgatccctgagggccggccgaactgccttgcgggcctcacg
ctcgtgtttacgggcgagctgtcgagtcttgggcgcgacgatgcggtggatctcgccaag
cgatatggagcgtacgtggcgatactaacatgcagcaaggtcacgacggcgccctcgtcc
aagacctctttcgtcgtggtcggtgaaggcgcgggggccaagaagctcgagaccatccag
aagaaccgattaaagacacttgatgaagacgggttccttcagctgatcgctgagcgcggc
gcacagaaactcgacgagcgtgtcaaggacaaactcgccgccgaggagaaaaaggtccag
gcggctgcgcgcgcgctcgagacgtccagcgcgcctggccagctgtggacgtccaagtac
gcgccgaagcagctcaaggagctcgttgggaacaagtccaacgtcgaaaagctgcaggcc
tggctgcgcgactggcccaagtcgctgcaggccaattttaagaagccggggccgcatgcg
accaacacgttccgcgcgatgctgatttccggcgcgccgggcattggcaagacgacggcg
gtacatctggtgtgcaagcttgagggatacgaggtgctggagctgaatgcgagcgataca
cggagcaagaggctgctcgagagcgagctgagccagaccatccacaaccgctcgatcggc
gactgggccaagcccggcacggcgaaactggggcgcctcgcgatcgtactcgatgaagtc
gatggtatgtcaggcggcgaccgtggcggcattggcgcgatcaacgcgctgatccgcaag
acgcaggtgcccatcatctgcatctgcaacgaccggcgcaaccccaagatgcagccactg
tactcgacgacattcaacatgacctttgcgaagccgacggtccaggccattcgctcgcgc
atgctgtcgattgcgtttcgcgagggcctccagatccctgccgaggtcatggaccagctc
atcgcggccgcccaaagcgacctgcgtctcgtgaccaacatgctgtcgacgtggaagctg
tcgcacaagcgcatgtcgtttgatgaaggcaagaagtttggcgccgcgaaccaaaagccc
acgctgcaaacacccttctcgctgtacggcgagctggcgagtccccagcgctttggaccg
ctcaataagcagtcgctcaacgacaagctggattactactttcaggaccatgcattcgtg
cccctgatggtcgctgagaactacatcaagagccagcccgtgcttgcgcagcgggagtcg
gtgccggccctcaaggagtggaagcagctgcagctcctgcgcaatgcgtccgagtcgatc
tcggatggcgacctggtggacacgctcatgcatggaccgcagcagcactggtcgctcatg
ccactgcacggcattgcgagcagtgtgcgcccctgctcgtacatttacggcgggcattca
tcgttccccgcgttcccctccttcttgggccaaaactccaagcgcatgcgtctgcagcgc
caactcgtggacctgcagacccgcctgcgtcttagcactacaggctcgaaagacgacgtg
cgccagtcgtacgtgccaggtctgctctcggtgctcgtggatccaattttgcaggcgggt
caggcggccatcccaggcgtcatcgatactatggacgagtactacctcctgcccgaggac
cgtgagacgctcgtggagctcgagctgggcgacgtgcggcgcgaggaccggctcaagaag
gtgccagcggccgttaaatcggctttcacgcgcgcctacaatgctcgcagccagtacgta
tcctgcactgactccagtccgatggcattcctgaaaacggcggcgccaacgcccaagggc
cgcgcgatcaagaccgagatgcccgacaacgaagaggcttacggggcggatgaggagcct
gccgaagacgcagacgacgaggcggatgcccaggccgacctggatcctaccaaggatgcg
ctcctgcgaccggccaaacggccaaagagcgctgctcgatctcgagcgtccaagtaa

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