Malassezia sympodialis: MSY001_2287
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Entry
MSY001_2287 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
msym
Malassezia sympodialis
Pathway
msym03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MSY001_2287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msym03041
]
MSY001_2287
Spliceosome [BR:
msym03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
MSY001_2287
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_Gbeta
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR90_beta-prop_4th
PRP4
Beta-prop_WDR41
Beta-prop_Aladin
ANAPC4_WD40
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
WDR54
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_DCAF4
WD_LRWD1
Beta-prop_EIPR1
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
30057172
NCBI-ProteinID:
XP_018740821
UniProt:
M5EAE6
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MADEAGIALDDLGTDLAPAPVSAGDAALHAMLEQRKLAHQVPVPTSDVQVRERLRQYGEP
MTLFGEREPDRRARLLQVLIARHGKNAVNLSHAPSAEAADEDEEEFYTEGSTDLLVARRR
IAMDSLSRAKARRAYQRREARVSMQDVAQLRKQVLEPLKTCQLLGSQIAGSRPISMVRFA
PDASILATGSWSGHAALWSLPNATARGAALAGHEDRISGLAWHPCATLTQTPSAVNLATG
AGDGTVCLWSLADERPLLRTLRGHEARVCRTAFHPMGDYLVSASYDGTWRLWDVERGLEL
LLQEGHSRAVYAIDVHGDGSLVASGGLDAIGRLWDTRTGRTAMVLDGHAREILSLAFAPN
GYHLLSASGDDTVRVWDLRTLSTVYTIPAHRSSVADVRFFTAASERPRAPAPWWAGSDVS
MDVDDAGDAPALRRSGLYFATAGYDGLVKLWSADDWQLVQSLRGDSGKVMSVDISADGQY
IASGEWGRTFKLWGSL
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggcggggatcgccttggacgatctcggtacagacctggcgcccgcgccg
gtcagtgccggggatgcggcgctacatgctatgctggagcagcgcaaactcgcgcaccag
gtgccggtgcccacctctgacgtccaggtgcgcgagcgcctgcggcagtatggcgagcct
atgaccctgtttggcgagcgcgagccggaccggcgcgcgcgtcttttgcaggtgctgatc
gcgcgccacgggaaaaatgccgtgaacttgtcgcacgcgccgtccgccgaggcggcggac
gaggacgaggaggaattctacaccgagggctctactgacctcctcgtcgcgcggcggcgc
atcgcgatggactccctttcgcgcgccaaggcgcgccgcgcgtaccagcgccgcgaggcg
cgtgtgtcgatgcaggacgtcgcacagctccgcaaacaagtgctcgagcccctcaagacg
tgccagctgctcggctcgcagatcgccggatcgcggcccatctccatggtgcgctttgcg
ccagacgcgtccatcctggcgactggatcatggtctggccacgcggcgctgtggtcgctg
ccgaatgcgacggcccgcggcgcggcactcgcgggtcacgaggaccgcataagcggcctg
gcgtggcacccgtgcgccacactcacgcagacgccgagcgcggtgaaccttgcgacgggc
gcgggcgatggcaccgtgtgcctctggtcgctcgcggacgagcggcctctcctgcgcacg
ctgcgcggccacgaggcgcgtgtgtgtcgcacagcgttccacccgatgggtgactatctc
gtgagtgcctcgtacgacggaacgtggcgcctctgggacgtggagcgcgggctcgagctc
ctgctccaggaaggccacagccgcgcggtgtatgcgattgatgtccacggcgatggctcg
ctcgtagcgtcgggcggcctcgatgcgatcgggcgcctgtgggacacacgcaccgggcgc
acggccatggtgctcgatggccatgcgcgcgagatcctcagccttgccttcgcgccgaac
ggctaccacctgctctcggcgtccggcgacgatacggtgcgtgtgtgggatctgcgcacg
ctcagcaccgtctacacgattcctgcgcaccgctcgtccgtggcggatgtgcgcttcttc
accgcggcgagtgagcggccccgtgcaccggcgccctggtgggccggcagcgacgtgtcg
atggatgtggacgacgcaggcgatgcgccagcgctgcggcgctcaggcctctactttgcc
acggcggggtacgacgggctcgtcaagctgtggagtgccgacgactggcagctggtccag
tcgctgcgcggcgactcgggcaaggtgatgagcgtggacattagcgccgacgggcagtat
attgcgagtggcgagtgggggcgcacgttcaagctctgggggtcgctatag
DBGET
integrated database retrieval system