KEGG   Malassezia sympodialis: MSY001_2333
Entry
MSY001_2333       CDS       T06541                                 
Name
(RefSeq) uncharacterized protein
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
msym  Malassezia sympodialis
Pathway
msym03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:msym00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MSY001_2333
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msym03021]
    MSY001_2333
   03036 Chromosome and associated proteins [BR:msym03036]
    MSY001_2333
Transcription machinery [BR:msym03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     MSY001_2333
   Coactivators
    SAGA/TFTC/STAGA complex
     MSY001_2333
Chromosome and associated proteins [BR:msym03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     MSY001_2333
    STAGA complex
     MSY001_2333
    TFTC complex
     MSY001_2333
    SAGA complex
     MSY001_2333
    SLIK complex
     MSY001_2333
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 TFIID_NTD2 WD40_CDC20-Fz EIF3I WD40_WDHD1_1st Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_EML ANAPC4_WD40 Beta-prop_TEP1_C WDR90_beta-prop_4th NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_Vps41 Ge1_WD40 Beta-prop_SPT8 Beta-prop_WDR75_2nd LisH
Other DBs
NCBI-GeneID: 30057218
NCBI-ProteinID: XP_018740865
LinkDB
Position
Unknown
AA seq 805 aa
MSSSSVMEYLRSHGFAKALSAFQTEMEATSKGATPAEASEASSAQLGSLDVSMTELANKN
VPRDPREKDAQDTGTGSALEQAGAQALLLDPTDTARGFAMIKSWCTGSLDIYQPELLPLL
LPLFVHSYLNMVDMGLGMAATEFFHAHASFFQPMHASLLSHLRSLCLPSHINTDELAQQF
RTERYVLKMSPNVFGLLIGWLTDGTSPVGFSSMDHASFVDSMLEPSRRGREAMLKIINER
CRIQVLRSAMFQLDPLELEEGTGLTGAGPSFASHGPLSVSRHHPLVHAAAVSESDAIADF
NARAAGPQLKLHPRIPLAEDLKDEVDHVLRDEQAQLQAKSKVEPTEKDTSTPTDTKDTNA
SSPASSSRDPSVPPQHEEAEDMEQEPTSDLLGPTLADLPPQPSMFRTVDLLREVERVRDA
RKCLRIDPKLAPQAASAADAKPPSSWDGVPRTVGLPSVCMYTFFDAEDGLTSSTFSSDLT
LMAAGFEESYVQVWSLKGEPVRELRSDFNLSSIRDRKTLQQHRAPGTMTSRKLIGHSAPV
YGVDFDPVGGSGSSPRHLLSCSADGTARLWSLDTFAALVAYRGHQYPLWDVTWGPLGTYF
ATASADRTARLWSVERINPLRIYAGHLSDVDCLRFHPNSLYLATGSSDRSCRLWDVQRGA
CVRLFVGHQSPISCLRISSDGRYLASASDGNASIKFGQTRRSSADAYTVSLWDLASGRRI
KKMWGHTSTIHDMDFSADGAVLVTGSADNTVRCWDVRTAQESPSGEADASSDCVATYFTK
NTPAHSVHFSPRNLCLAAGVYSAST
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgtcgtcgtcgtctgtcatggaatatctgcgttcgcatgggtttgccaaagcactcagt
gcttttcagaccgaaatggaggccacctccaaaggcgctacccctgcagaggcttcagag
gcgtccagcgcgcagttaggcagcctggacgtcagtatgactgagctcgccaataagaac
gttcctagggatcccagggaaaaggatgcccaggataccggcacgggttcggcgttagag
caggctggtgcgcaggcgctgttgctagatccaacagacacggcacgcgggttcgctatg
atcaagtcgtggtgcacgggcagtctggacatttaccagccagagttgttacctctgttg
cttccgctttttgtgcacagctacctaaatatggtggatatgggcctgggcatggcggca
actgagttttttcatgctcacgcttccttctttcagcccatgcacgcaagcttgctatcc
catctacgctcgctgtgcctcccatcacacataaacacggatgagctagcgcagcaattt
cgtacggaacgctacgtcctgaagatgtcgcctaatgtgtttggtcttttgatcgggtgg
ctcacggatggtacaagtcctgtgggattctcgtctatggatcacgcttccttcgtggac
agcatgctagagccatctcgacgcggccgcgaggccatgttgaagattatcaacgaacgc
tgccgcatccaggttctacgctcggccatgttccagctggaccccttggaactcgaggaa
gggacaggccttactggcgctggcccctccttcgcatcacatggccccttgtccgtgtcg
cgacaccatccgcttgtccatgcggcggcggtctctgagtcggatgccattgctgacttt
aatgctcgtgcagcaggacctcaattaaaactacatccccgcatcccgctggccgaggac
ttgaaggacgaagtggaccatgttttgcgcgatgaacaggcccaattgcaggccaagtcc
aaagtcgagcctaccgagaaagacacgtcaacccccaccgacaccaaggataccaacgca
tcatcgcctgcctcgagctcgcgcgatccctctgtgcctccgcagcacgaggaggccgag
gatatggagcaggagccaacatcagatctgttggggccgaccttggcagatctgcccccc
cagccgtccatgttccgtactgtggatctgctgcgcgaggtcgagcgtgtgcgagacgca
cgcaagtgtctacgcattgatcccaaactagcacctcaggctgcctctgccgccgatgcc
aagccgccgagcagctgggatggtgtcccgcgcaccgtgggtctcccgagcgtctgcatg
tacaccttttttgatgccgaggatggtcttacgagcagtacgttttcgtcggacttgacg
ctgatggcggctgggttcgaggaaagctatgtgcaagtgtggagtctgaagggcgagcca
gtacgcgagctgcgcagtgactttaatttatcgtctatccgcgatcgaaagacgctgcag
cagcaccgggcccctggcaccatgacgtcacgcaagttgattggacacagtgcccctgtg
tatggcgtcgacttcgatcctgtgggcggtagtgggtcaagcccgcggcacctgctgagc
tgcagtgcggatggcacagcccggctctggagcctcgatacgtttgcggcgctcgtggcc
taccgcggtcaccagtacccgttgtgggacgtaacatggggccccctgggcacctacttt
gcaacggcaagcgcggatcgcacggcgcggctgtggagtgtggagcgaatcaacccgctg
aggatttacgcaggacacttgtcggacgtggactgtctgcgattccatcccaactcacta
tacctagccactggttcttcagaccgctcgtgccggttgtgggacgtgcaacggggcgcg
tgcgtgcgtttgtttgttgggcaccagtcgcccatttcctgtctgcgcatcagctcagat
ggacggtatttggcgtctgccagcgatggaaatgcgtcgataaagtttggtcaaacgaga
cggtcctccgctgatgcctacacggttagcttgtgggatctcgcaagtggtcggcggatc
aagaagatgtggggacacacatcgacgatccatgatatggactttagtgcggatggtgct
gtgctggtcacaggctctgccgacaacacagtgcgctgctgggatgtgcgcacggcgcag
gagtcgcccagcggtgaagcggatgcgagcagtgactgcgttgcaacgtacttcaccaaa
aatacaccagcacacagtgtgcacttctcgccgcgcaacttgtgtcttgccgcaggggtg
tattcagcctctacatag

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