Malassezia sympodialis: MSY001_2617
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Entry
MSY001_2617 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K03361
F-box and WD-40 domain protein CDC4
Organism
msym
Malassezia sympodialis
Pathway
msym04111
Cell cycle - yeast
msym04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
MSY001_2617
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
MSY001_2617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msym04121
]
MSY001_2617
Ubiquitin system [BR:
msym04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
MSY001_2617
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
ANAPC4_WD40
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_IFT122_1st
F-box-like
Beta-prop_HPS5
Beta-prop_Nup120_160
Beta-prop_DCAF12
WD40_like
WD40_MABP1-WDR62_1st
Beta-prop_LRRK2
F-box
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_RIG_1st
Beta-prop_IFT140_2nd
Beta-prop_VPS8
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_WDR11_2nd
WD40_RFWD3
Beta-prop_IP5PC_F
CycT2-like_C
Motif
Other DBs
NCBI-GeneID:
30057502
NCBI-ProteinID:
XP_018741134
UniProt:
M5EC56
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MTSLADALGSFVAATPSERYQFLEALVRECHVRELSDLESMIVPRLKVDFLQRLPREVAL
HTLTFLDDCSSLVRASAVSQTWYRLATDEYIWGWMCVRYGYHTPQHLDWLVASLVPASSL
EMQEKDESMALDGVKARRRRSFFAGSIDRLPPPGQSGTVAFRDYFRLAYLTAWHWQKGGR
ILSTYVTEELADADPDPNRRLALTCCAMDRDWIVVGLTNSCIYVFSKRTGKLANVLQGHE
SGVWCLLLATGTQRGTPYVMHNAPLGLQLAQSDDRPAAMLPLVEHGGLSVRDAAYAAERC
QATDTACGRTHGWGRTETLVVSAGSDRSLRVWDVATGHCMQVLHGHTSTIRCAQGIPGQP
FFVTGSRDGTLRVWDLERGVVRHVLAGHQHSVRCLAVHGHQVASGSYDFTCRVWDWTRGQ
CLHVLKGHQLQVYAVAFDGTHVITGSSDSTVRVWSATTGAMLAMFQGYTHVVAHLQLFGD
MLATGSSDGRVLVYSLRTLECLYRLCAHDSGVTTLQLNDRYMVTGGSDGLVKLWDVTTGR
FLRYLCEPCETVWSVRFDDDTCVILAKRHGKCVVEIMSLRPM
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgacatccttggcggatgcattgggcagctttgtagctgctacaccgtctgaaagatat
caatttttggaagcgttggtgcgagagtgtcatgttcgcgaactttccgacttggagtca
atgattgtgccgcgactcaaagtggactttcttcagcgtttgcctagggaggtggcgctg
cataccctcacgtttcttgatgactgcagctcccttgttcgtgcttcggctgttagccaa
acatggtatcgactggctacagatgaatacatttggggctggatgtgcgtgcgctatggg
taccatactccgcaacaccttgactggctcgtagcgagtttggtcccagcctcttccttg
gagatgcaagaaaaggatgagagcatggcattagatggtgtaaaagcccggcggcggcgc
tccttctttgccggttcaatcgaccggcttccgccacccggccagagcggcaccgtggcg
tttcgggactatttccggttggcctacttgacagcatggcactggcagaagggaggccgt
attctttcgacctatgtgaccgaagagctagcggatgctgacccagaccccaatcgacgc
ctggccctcacttgctgtgctatggaccgtgactggatcgtcgtgggtttgacgaacagt
tgcatctatgtgttctcaaagcgcacgggtaagctagcgaatgtgctgcagggccatgaa
agtggtgtatggtgcctcttgctggcaacgggtacccaacgcggaacgccgtacgtgatg
cataacgccccgcttggtttgcagcttgcgcagtcagacgataggcctgcagcgatgctc
ccgctggtcgaacatggtggattgtctgtgcgggatgctgcctatgcggccgagcgctgt
caggccactgataccgcttgtggccgcacgcacggctggggccgtacagagacgctggtc
gttagtgctggctccgaccggagccttcgtgtatgggatgtggcaacgggacactgcatg
caagtgctgcatggtcatacctccacgatacgatgtgctcaaggcatccccggacaaccg
ttttttgtgacaggttcccgcgacggcaccctgcgtgtgtgggatctcgagaggggcgtg
gtgcgacatgtgttggctgggcaccagcactcagtacggtgcctggccgtgcatggacac
caggtggcgagtggcagctatgacttcacgtgtcgcgtgtgggattggacccgggggcag
tgccttcacgttctcaaggggcaccagctgcaagtgtatgcggtggcttttgatgggacg
catgttatcactggcagctctgactcaacagtacgggtatggagtgcgacgactggagcg
atgctggccatgttccaaggctatacgcatgtggttgcccacttgcagctcttcggcgat
atgttagcaacgggaagcagtgacggccgcgtgcttgtgtattcgctgcggacgttggaa
tgcctgtaccggctttgtgctcacgatagtggtgtcaccaccctgcaactgaacgaccgc
tacatggtcacgggtggctcggatggccttgtcaagttatgggacgtgaccaccgggcgc
tttctgcgatatctgtgtgagccgtgtgagacggtgtggtcggtgcgcttcgatgacgat
acatgtgtgatcctggccaagcgacacggtaagtgcgtcgtagagatcatgtcgttgcgg
cctatgtag
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integrated database retrieval system