Malassezia sympodialis: MSY001_2677
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Entry
MSY001_2677 CDS
T06541
Name
(RefSeq) uncharacterized protein
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
msym
Malassezia sympodialis
Pathway
msym03020
RNA polymerase
msym03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
msym00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSY001_2677
09124 Replication and repair
03420 Nucleotide excision repair
MSY001_2677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msym03021
]
MSY001_2677
03400 DNA repair and recombination proteins [BR:
msym03400
]
MSY001_2677
Transcription machinery [BR:
msym03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
MSY001_2677
DNA repair and recombination proteins [BR:
msym03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
MSY001_2677
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
30057562
NCBI-ProteinID:
XP_018741192
UniProt:
M5EBF3
LinkDB
All DBs
Position
Unknown
AA seq
162 aa
AA seq
DB search
MANAPDRFNLFLLQPGEQRIEIQEDMRLPNAATFVFNKEDHTLGNMLRHAVLAQPGVLFC
GYKVPHPLEPRVLVKIQTDGSQTPAEVLQQACTKLIVQMGSLKQTWAKEVRLGADGAAPY
APAMWSAYGAGAPAPGAEAPLDAYAADTDGAAGGAMGGYVDM
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgcgccagaccgcttcaacctgttcctcctacagccgggggagcagcgcatc
gagatccaggaggacatgcggctgccgaacgctgccacgttcgtgttcaacaaggaggac
cacacgctcggcaacatgctccgccacgccgtgctcgcgcagccgggcgtcctcttctgt
gggtacaaggtgccgcatccgctggagccgcgcgtgctcgtcaagatccagacggacggg
tcgcagacgcctgcggaagtgctgcagcaggcgtgcacgaagctcatcgtccagatgggc
tcgctcaagcagacctgggccaaggaggtgcgcctcggcgcggacggcgccgcgccgtat
gcgccggccatgtggtccgcctatggtgcgggtgcgccggcccccggtgccgaggccccg
ctcgatgcgtatgcagccgacacagacggcgccgcgggcggcgcgatgggcggctatgta
gatatgtaa
DBGET
integrated database retrieval system
